Publications

Full publication list at Google Scholar.

Dual-Mode Bio-CM²: Multimodal Computational Miniature Mesoscope for Fluorescence and Label-Free Imaging

Qilin Deng, Guorong Hu, Bradley C. Rauscher, Marcelo Villafuerte, Bethany Weinberg, Zhixiong Chen, Hui Feng, Anna Devor, Martin Thunemann, and Lei Tian
bioRxiv, 2026.09.08.750281 (2026). Preprint.

Point Spread Function Engineering Using Implicit Neural Representations

Suet Ying Chan, Mitchell Gilmore, Qilin Deng, Guorong Hu, Joseph Greene, Ruipeng Guo, and Lei Tian
arXiv:2608.20277 (2026). Preprint.

Bio-CM²: Distributed computational optics for cortex-wide cellular imaging

Guorong Hu, Qilin Deng, Tianrui Qi, Zhixiong Chen, Bradley C. Rauscher, Nathan Chai, Daria Bogatova, Bethany Weinberg, Jesse Smith, Ian G. Davison, Martin Thunemann, Anna Devor, and Lei Tian
bioRxiv, 2026.07.27.740823 (2026). Preprint.

DeepFilters: Scattering-Aware Pupil Engineering with Learned Digital Filter Reconstruction for Extended Depth of Field Microscopy

Joseph L. Greene, Suet Ying Chan, Qilin Deng, Jeffrey Alido, Alexandra Lion, Guorong Hu, Ruipeng Guo, Tongyu Li, Kivilcim Kiliç, Ian Davison, and Lei Tian
arXiv:2605.13619 (2026). Preprint.

Versatile high-speed volumetric imaging from microscopic to macroscopic scale by self-adaptive oblique plane microscopy

Dominique Meyer, Grant Kroeschell, Xiankun Lu, Linh Hoang, Haochen Wang, Shuying Li, Yu Kang T Xu, Lei Tian, Jeff S Mumm, Dwight E Bergles, and Ji Yi
bioRxiv, 2025.12.16.694458 (2026). Preprint.

Physics-informed neural network for mapping vascular and tissue dynamics using laser speckle contrast imaging

Shuying Li, Rockwell Tang, Bingxue Liu, Victoria Krepulec, Will Donovan, David Boas, Xiaojun Cheng, and Lei Tian
Neurophotonics, Vol. 13, Issue 3, 035012, 2026.

Dual-wavelength Fourier Ptychographic Topography

Yi Shen, Tongyu Li, Hao Wang, Jinyong Kim, Hojun Lee, Wookrae Kim, Jonghyeok Park, Junho Shin, Seungbeom Park and Lei TianIEEE Transactions on Computational Imaging 2026.

Coordinate-conditioned Deconvolution for Scalable Spatially Varying High-Throughput Imaging

Qianwan Yang; Zhixiong Chen; Jiaqi Zhang; Ruipeng Guo; Guorong Hu; Lei Tian
IEEE Transactions on Computational Imaging 2026.

An end-to-end hybrid deep-learning approach for single-shot wavefront sensing and correction

Sina Moayed Baharlou, Muhammad Waleed Khalid, Guli Gulinihali, Jeongho Ha, Liyi Hsu, Samantha C. Lewis, Lei Tian, Yeshaiahu Fainman, Alexander V. Sergienko, and Abdoulaye Ndao
Nature Communications 17, 6340 (2026).

Dual-channel event microscopy for ultrafast biological imaging

R. Guo, X. Pan, Q. Deng, A. Ahmed, Q. Yang, J. Greene, T. Li, S.Y. Chan, Z. Chen, G. Hu, H. Feng, & L. Tian
Proc. Natl. Acad. Sci. (PNAS) 123 (17) e2531386123

Mid-infrared photothermal relaxation intensity diffraction tomography for video-rate volumetric chemical imaging

Danchen Jia, Dashan Dong, Tongyu Li, Haonan Zong, Jiabei Zhu, Xinyan Teng, Lei Tian, and Ji-Xin Cheng
Optics Express 34, 16440–16453 (2026).

Transfer-function approach to substrate-enhanced diffraction tomography

Tongyu Li, Yi Shen, Dashan Dong, Danchen Jia, Jianpeng Ao, Ji-Xin Cheng, and Lei Tian
Optica, 2026.
⭑ Github Project

The neurovascular impulse response function differentially reflects intrinsic neuromodulation across cortical regions

B. C. Rauscher, N. Fomin-Thunemann, S. Kura, P. R. Doran, P. D. Perez, K. Kılıç, E. A. Martin, D. Balog, N. X. Chai, F. A. Froio, P. F. Bloniasz, K. E. Herrema, R. P. Tang, S. G. Knudstrup, A. Garcia, J. X. Jiang, J. P. Gavornik, M. London, D. Kleinfeld, M. E. Hasselmo, L. D. Lewis, S. Sakadzic, L. Tian, G. Mishne, E. P. Stephen, M. Thunemann, D. A. Boas, and A. Devor
Nature Neuroscience 29, 1203–1211 (2026).