Publications
Full publication list at Google Scholar.

Reflection-mode diffraction tomography of multiple-scattering samples on a reflective substrate from intensity images
Reflection-mode diffraction tomography of multiple-scattering samples on a reflective substrate from intensity images
Tongyu Li, Jiabei Zhu, Yi Shen, and Lei Tian
Optica Vol. 12, Issue 3, pp. 406-417 (2025).

Chiral phase-imaging meta-sensors
Chiral phase-imaging meta-sensors
Ahmet M. Erturan, Jianing Liu, Maliheh A. Roueini, Nicolas Malamug, Lei Tian, and Roberto Paiella
Nanophotonics 14(7), 947–957 (2025).

Label-free nanoscopy of cell metabolism by ultrasensitive reweighted visible stimulated Raman scattering
Label-free nanoscopy of cell metabolism by ultrasensitive reweighted visible stimulated Raman scattering
Haonan Lin, Scott Seitz, Yuying Tan, Jean-Baptiste Lugagne, Le Wang, Guangrui Ding, Hongjian He, Tyler J. Rauwolf, Mary J. Dunlop, John H. Connor, John A. Porco Jr., Lei Tian & Ji-Xin Cheng
Nature Methods (2025).

Enhanced multiscale human brain imaging by semi-supervised digital staining and serial sectioning optical coherence tomography
Enhanced multiscale human brain imaging by semi-supervised digital staining and serial sectioning optical coherence tomography
Shiyi Cheng, Shuaibin Chang, Yunzhe Li, Anna Novoseltseva, Sunni Lin, Yicun Wu, Jiahui Zhu, Ann C. McKee, Douglas L. Rosene, Hui Wang, Irving J. Bigio, David A. Boas & Lei Tian
Light: Science & Applications 14, 57 (2025).
⭑ Github Project

DeepVID v2: self-supervised denoising with decoupled spatiotemporal enhancement for low-photon voltage imaging
DeepVID v2: self-supervised denoising with decoupled spatiotemporal enhancement for low-photon voltage imaging
Chang Liu, Jiayu Lu, Yicun Wu, Xin Ye, Allison M. Ahrens, Jelena Platisa, Vincent A. Pieribone, Jerry L. Chen, Lei Tian
Neurophotonics, Vol. 11, Issue 4, 045007 (October 2024).
⭑ Github Project

Cell classification with phase-imaging meta-sensors
Cell classification with phase-imaging meta-sensors
Haochuan Hu, Jianing Liu, Lei Tian, Janusz Konrad, and Roberto Paiella
Optics Letters Vol. 49, Issue 20, pp. 5759-5762 (2024)

NeuPh: scalable and generalizable neural phase retrieval with local conditional neural fields
NeuPh: scalable and generalizable neural phase retrieval with local conditional neural fields
Hao Wang, Jiabei Zhu, Yunzhe Li, Qianwan Yang, Lei Tian
Advanced Photonics Nexus, Vol. 3, Issue 5, 056005 (August 2024)
⭑ Github Project

EventLFM: event camera integrated Fourier light field microscopy for ultrafast 3D imaging
EventLFM: event camera integrated Fourier light field microscopy for ultrafast 3D imaging
Ruipeng Guo, Qianwan Yang, Andrew S. Chang, Guorong Hu, Joseph Greene, Christopher V. Gabel, Sixian You & Lei Tian
Light: Science & Applications 13: 144 (2024).

Wide-field, high-resolution reconstruction in computational multi-aperture miniscope using a Fourier neural network
Wide-field, high-resolution reconstruction in computational multi-aperture miniscope using a Fourier neural network
Qianwan Yang, Ruipeng Guo, Guorong Hu, Yujia Xue, Yunzhe Li, and Lei Tian
Optica Vol. 11, Issue 6, pp. 860-871 (2024).
⭑Github Project

HiLo microscopy with caustic illumination
HiLo microscopy with caustic illumination
Guorong Hu, Joseph Greene, Jiabei Zhu, Qianwan Yang, Shuqi Zheng, Yunzhe Li, Jeffrey Alido, Ruipeng Guo, Jerome Mertz, and Lei Tian
Biomedical Optics Express Vol. 15, Issue 7, pp. 4101-4110 (2024). ⭑ On the Cover

Robust single-shot 3D fluorescence imaging in scattering media with a simulator-trained neural network
Robust single-shot 3D fluorescence imaging in scattering media with a simulator-trained neural network
J. Alido, J. Greene, Y. Xue, G. Hu, Y. Li, K. Monk, B. DeBenedicts, I. Davison, L. Tian
Optics Express Vol. 32, Issue 4, pp. 6241-6257 (2024).
⭑Github Project

Asymmetric metasurface photodetectors for single-shot quantitative phase imaging
Asymmetric metasurface photodetectors for single-shot quantitative phase imaging
Jianing Liu , Hao Wang , Yuyu Li , Lei Tian, Roberto Paiella
Nanophotonics (2023).

Mid-infrared chemical imaging of intracellular tau fibrils using fluorescence-guided computational photothermal microscopy
Mid-infrared chemical imaging of intracellular tau fibrils using fluorescence-guided computational photothermal microscopy
Jian Zhao, Lulu Jiang, Alex Matlock, Yihong Xu, Jiabei Zhu, Hongbo Zhu, Lei Tian, Benjamin Wolozin & Ji-Xin Cheng
Light: Science & Applications 12, 147 (2023).

Pupil engineering for extended depth-of-field imaging in a fluorescence miniscope
Pupil engineering for extended depth-of-field imaging in a fluorescence miniscope
Joseph Greene, Yujia Xue, Jeffrey Alido, Alex Matlock, Guorong Hu, Kivilcim Kiliç, Ian Davison, Lei Tian
Neurophotonics, Vol. 10, Issue 4, 044302 (2023).

High-Speed Low-Light In Vivo Two-Photon Voltage Imaging of Large Neuronal Populations
High-Speed Low-Light In Vivo Two-Photon Voltage Imaging of Large Neuronal Populations
Jelena Platisa, Xin Ye, Allison M Ahrens, Chang Liu, Ichun A Chen, Ian G Davison, Lei Tian, Vincent A Pieribone, Jerry L Chen
Nature Methods 20, 1095–1103 (2023).
⭑Github Project
⭑ Spotlight: AI to the rescue of voltage imaging, Cell Reports Methods

3D Chemical Imaging by Fluorescence-detected Mid-Infrared Photothermal Fourier Light Field Microscopy
3D Chemical Imaging by Fluorescence-detected Mid-Infrared Photothermal Fourier Light Field Microscopy
Danchen Jia, Yi Zhang, Qianwan Yang, Yujia Xue, Yuying Tan, Zhongyue Guo, Meng Zhang, Lei Tian, Ji-Xin Cheng
Chem. Biomed. Imaging 2023, 1, 3, 260–267

Fourier ptychographic topography
Fourier ptychographic topography
H. Wang, J. Zhu, J. Sung, G. Hu, J. Greene, Y. Li, S. Park, W. Kim, M. Lee, Y. Yang, L. Tian
Optics Express 31, pp. 11007-11018 (2023)
⭑Open-Source Dataset

Multiple-scattering simulator-trained neural network for intensity diffraction tomography
Multiple-scattering simulator-trained neural network for intensity diffraction tomography
A. Matlock, J. Zhu, L. Tian
Optics Express 31, 4094-4107 (2023)

Bond-Selective Intensity Diffraction Tomography
Bond-Selective Intensity Diffraction Tomography
Jian Zhao, Alex Matlock, Hongbo Zhu, Ziqi Song, Jiabei Zhu, Biao Wang, Fukai Chen, Yuewei Zhan, Zhicong Chen, Yihong Xu, Xingchen Lin, Lei Tian, Ji-Xin Cheng
Nature Commun. 13, 7767 (2022).

Recovery of Continuous 3D Refractive Index Maps from Discrete Intensity-Only Measurements using Neural Fields
Recovery of Continuous 3D Refractive Index Maps from Discrete Intensity-Only Measurements using Neural Fields
Renhao Liu, Yu Sun, Jiabei Zhu, Lei Tian, Ulugbek Kamilov
Nature Machine Intelligence 4, 781–791 (2022).
