{"id":133,"date":"2016-08-12T18:32:06","date_gmt":"2016-08-12T22:32:06","guid":{"rendered":"https:\/\/sites.bu.edu\/tianlab\/?page_id=133"},"modified":"2026-04-01T20:43:59","modified_gmt":"2026-04-02T00:43:59","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.bu.edu\/tianlab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

Full publication list at Google Scholar<\/a>.<\/strong><\/p>\n

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JOURNAL PUBLICATIONS<\/h4>\n

Transfer-function approach to substrate-enhanced diffraction tomography<\/strong><\/a>
\nTongyu Li, Yi Shen, Dashan Dong, Danchen Jia, Jianpeng Ao, Ji-Xin Cheng, and Lei Tian
\nOptica<\/strong><\/em>, 2026.
\n\u2b51\u00a0<\/span>Github Project<\/a><\/strong><\/p>\n

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Reflection-mode Multi-slice Fourier Ptychographic Tomography<\/strong><\/a>
\nJ Zhu, T Li, H Wang, Y Shen, G Hu, L Tian
\nIEEE Transactions on Computational Imaging<\/em><\/strong>, 2026
\n\u2b51\u00a0<\/span>Github Project<\/a><\/strong><\/p>\n

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Whitened Score Diffusion: A Structured Prior for Imaging Inverse Problems
\n<\/strong><\/a>J Alido, T Li, Y Sun, L Tian
\nNeurIPS<\/strong><\/em> 2025.
\n\u2b51\u00a0<\/span>Github Project<\/a><\/strong><\/p>\n

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Age-informed, attention-based weakly supervised learning for neuropathological image assessment
\n<\/strong><\/a>Shuying Li, Maxwell Malamut, Ann McKee, Jonathan D Cherry, Lei Tian
\nBrain Informatics<\/strong><\/em> 12 (1), 27<\/p>\n

\"Fig.\u00a01\"<\/p>\n

Self-supervised elimination of non-independent noise in hyperspectral imaging<\/strong><\/a>
\nG Ding, C Liu, J Yin, X Teng, Y Tan, H He, H Lin, L Tian, JX Cheng
\nNewton<\/strong><\/em> 1 (6)
\n<\/p>\n

Reflection-mode diffraction tomography of multiple-scattering samples on a reflective substrate from intensity images<\/strong><\/a>
\nTongyu Li, Jiabei Zhu, Yi Shen, and Lei Tian
\nOptica<\/strong><\/em> Vol. 12, Issue 3, pp. 406-417 (2025).<\/p>\n

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Chiral phase-imaging meta-sensors<\/a><\/strong>
\nAhmet M. Erturan , Jianing Liu , Maliheh A. Roueini , Nicolas Malamug , Lei Tian & Roberto Paiella
\nNanophotonics<\/strong><\/em> (2025).
\n\"Figure<\/p>\n

Label-free nanoscopy of cell metabolism by ultrasensitive reweighted visible stimulated Raman scattering<\/strong><\/a>
\nHaonan Lin, Scott Seitz, Yuying Tan, Jean-Baptiste Lugagne, Le Wang, Guangrui Ding, Hongjian He, Tyler J. Rauwolf, Mary J. Dunlop, John H. Connor, John A. Porco Jr., Lei Tian & Ji-Xin Cheng
\nNature Methods<\/strong><\/em> (2025).<\/p>\n

\"Fig.<\/p>\n

Enhanced multiscale human brain imaging by semi-supervised digital staining and serial sectioning optical coherence tomography<\/strong><\/a>
\nShiyi Cheng, Shuaibin Chang, Yunzhe Li, Anna Novoseltseva, Sunni Lin, Yicun Wu, Jiahui Zhu, Ann C. McKee, Douglas L. Rosene, Hui Wang, Irving J. Bigio, David A. Boas & Lei Tian
\nLight: Science & Applications<\/strong><\/em> 14, 57 (2025).
\n\u2b51\u00a0<\/span>Github Project<\/a><\/strong><\/p>\n

\"Fig.<\/p>\n

DeepVID v2: self-supervised denoising with decoupled spatiotemporal enhancement for low-photon voltage imaging<\/a>
\n<\/strong>Chang Liu, Jiayu Lu, Yicun Wu, Xin Ye, Allison M. Ahrens, Jelena Platisa, Vincent A. Pieribone, Jerry L. Chen, Lei Tian
\nNeurophotonics<\/strong><\/em>, Vol. 11, Issue 4, 045007 (October 2024).
\n\u2b51\u00a0<\/span>Github Project<\/a><\/strong><\/p>\n

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Cell classification with phase-imaging meta-sensors<\/strong><\/a>
\nHaochuan Hu, Jianing Liu, Lei Tian, Janusz Konrad, and Roberto Paiella
\nOptics Letters<\/strong><\/em> Vol. 49, Issue 20, pp. 5759-5762 (2024)<\/p>\n

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NeuPh: scalable and generalizable neural phase retrieval with local conditional neural fields<\/strong><\/a>
\nHao Wang,\u00a0Jiabei Zhu,\u00a0Yunzhe Li,\u00a0Qianwan Yang,\u00a0Lei Tian
\nAdvanced Photonics Nexus<\/strong><\/em>, Vol. 3, Issue 5, 056005 (August 2024)
\n\u2b51 Github Project<\/a><\/strong><\/p>\n

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EventLFM: event camera integrated Fourier light field microscopy for ultrafast 3D imaging<\/strong><\/a>
\nRuipeng Guo, Qianwan Yang, Andrew S. Chang, Guorong Hu, Joseph Greene, Christopher V. Gabel, Sixian You & Lei Tian
\nLight: Science & Applications<\/strong><\/em> 13: 144 (2024).<\/p>\n

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Wide-field, high-resolution reconstruction in computational multi-aperture miniscope using a Fourier neural network<\/strong><\/a>
\nQianwan Yang, Ruipeng Guo, Guorong Hu, Yujia Xue, Yunzhe Li, and Lei Tian
\nOptica<\/strong><\/em> Vol. 11, Issue 6, pp. 860-871 (2024).
\n\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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HiLo microscopy with caustic illumination<\/a><\/strong>
\nGuorong Hu, Joseph Greene, Jiabei Zhu, Qianwan Yang, Shuqi Zheng, Yunzhe Li, Jeffrey Alido, Ruipeng Guo, Jerome Mertz, and Lei Tian
\nBiomedical Optics Express<\/strong><\/em> Vol. 15, Issue 7, pp. 4101-4110 (2024).\u00a0 \u2b51<\/strong>\u00a0O<\/em><\/strong><\/span>n the Cover<\/span><\/strong><\/span><\/p>\n

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Robust single-shot 3D fluorescence imaging in scattering media with a simulator-trained neural network <\/strong><\/a>
\nJ. Alido, J. Greene, Y. Xue, G. Hu, Y. Li, K. Monk, B. DeBenedicts, I. Davison, L. Tian
\nOptics Express<\/strong><\/em> Vol. 32, Issue 4, pp. 6241-6257 (2024).
\n\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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Asymmetric metasurface photodetectors for single-shot quantitative phase imaging<\/strong><\/a>
\nJianing Liu , Hao Wang , Yuyu Li , Lei Tian, Roberto Paiella
\nNanophotonics<\/strong><\/em> (2023).<\/p>\n

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Mid-infrared chemical imaging of intracellular tau fibrils using fluorescence-guided computational photothermal microscopy<\/strong><\/a>
\nJian Zhao, Lulu Jiang, Alex Matlock, Yihong Xu, Jiabei Zhu, Hongbo Zhu, Lei Tian, Benjamin Wolozin & Ji-Xin Cheng
\nLight: Science & Applications<\/strong><\/em> 12, 147 (2023).<\/p>\n

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Pupil engineering for extended depth-of-field imaging in a fluorescence miniscope<\/strong><\/a>
\nJoseph Greene, Yujia Xue, Jeffrey Alido, Alex Matlock, Guorong Hu, Kivilcim Kili\u00e7, Ian Davison, Lei Tian
\nNeurophotonics<\/strong><\/em>, Vol. 10, Issue 4, 044302 (2023).<\/p>\n

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High-Speed Low-Light In Vivo Two-Photon Voltage Imaging of Large Neuronal Populations<\/strong><\/a>
\nJelena Platisa, Xin Ye, Allison M Ahrens, Chang Liu, Ichun A Chen, Ian G Davison, Lei Tian, Vincent A Pieribone, Jerry L Chen
\nNature Methods<\/strong><\/em> 20,\u00a0<\/span>1095\u20131103 (<\/span>2023<\/span>)<\/span>.
\n\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a>
\n<\/strong>\u2b51<\/strong> Spotlight: <\/em>AI to the rescue of voltage imaging,<\/a> Cell Reports Methods<\/strong><\/span><\/span><\/p>\n

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3D Chemical Imaging by Fluorescence-detected Mid-Infrared Photothermal Fourier Light Field Microscopy<\/strong><\/a>
\nDanchen Jia, Yi Zhang, Qianwan Yang, Yujia Xue, Yuying Tan, Zhongyue Guo, Meng Zhang, Lei Tian, Ji-Xin Cheng
\nChem. Biomed. Imaging<\/strong><\/em> 2023, 1, 3, 260\u2013267<\/p>\n

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Fourier ptychographic topography<\/strong><\/a>
\nH. Wang, J. Zhu, J. Sung, G. Hu, J. Greene, Y. Li, S. Park, W. Kim, M. Lee, Y. Yang, L. Tian
\nOptics Express<\/strong><\/em>\u00a031, pp. 11007-11018 (2023)
\n\u2b51<\/span> <\/em><\/span><\/span>Open-Source Dataset<\/a>
\n<\/strong><\/p>\n

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Multiple-scattering simulator-trained neural network for intensity diffraction tomography<\/strong><\/a>
\nA. Matlock, J. Zhu, L. Tian
\nOptics Express<\/em><\/strong> 31, 4094-4107 (2023)<\/p>\n

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Bond-Selective Intensity Diffraction Tomography
\n<\/strong><\/a>Jian Zhao, Alex Matlock, Hongbo Zhu, Ziqi Song, Jiabei Zhu, Biao Wang, Fukai Chen, Yuewei Zhan, Zhicong Chen, Yihong Xu, Xingchen Lin, Lei Tian, Ji-Xin Cheng
\nNature Commun. <\/i><\/strong>13, 7767 (2022).<\/p>\n

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Recovery of Continuous 3D Refractive Index Maps from Discrete Intensity-Only Measurements using Neural Fields
\n<\/strong><\/a>Renhao Liu, Yu Sun, Jiabei Zhu, Lei Tian, Ulugbek Kamilov
\nNature Machine Intelligence<\/strong><\/em> 4, <\/span>781\u2013791 <\/span>(2022).<\/p>\n

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Deep-learning-augmented Computational Miniature Mesoscope<\/strong><\/a>
\nYujia Xue, Qianwan Yang, Guorong Hu, Kehan Guo, Lei Tian
\nOptica<\/strong><\/em>\u00a0<\/span>9, 1009-1021 (2022)<\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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High-fidelity intensity diffraction tomography with a non-paraxial multiple-scattering model<\/strong><\/a>
\nJiabei Zhu, Hao Wang, Lei Tian
\nOptics Express<\/strong><\/em> Vol. 30, Issue 18, pp. 32808-32821 (2022).<\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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Optical spatial filtering with plasmonic directional image sensors<\/strong><\/a>
\nJianing Liu, Hao Wang, Leonard C. Kogos, Yuyu Li, Yunzhe Li, Lei Tian, and Roberto Paiella
\nOptics Express<\/strong><\/em> Vol. 30, Issue 16, pp. 29074-29087 (2022).
\n\u2b51<\/strong> Editors’ pick<\/em><\/strong><\/span><\/span><\/p>\n

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Neurophotonic tools for microscopic measurements and manipulation: status report<\/strong><\/a>
\nAhmed Abdelfattah, Sapna Ahuja, Taner Akkin, Srinivasa Rao Allu, David A. Boas, Joshua Brake, Erin M. Buckley, Robert E. Campbell, Anderson I. Chen, Xiaojun Cheng, Tom\u00e1\u0161 Ci\u017em\u00e1r, Irene Costantini, Massimo De Vittorio, Anna Devor, Patrick R. Doran, Mirna El Khatib, Valentina Emiliani, Natalie Fomin-Thunemann, Yeshaiahu Fainman, Tom\u00e1s Fern\u00e1ndez Alfonso, Christopher G. L. Ferri, Ariel Gilad, Xue Han, Andrew Harris, Elizabeth M. C. Hillman, Ute Hochgeschwender, Matthew G. Holt, Na Ji, Kivilcim Kili\u00e7, Evelyn M. R. Lake, Lei Li, Tianqi Li, Philipp M\u00e4chler, Rickson C. Mesquita, Evan W. Miller, K.M. Naga Srinivas Nadella, U. Valentin N\u00e4gerl, Yusuke Nasu, Axel Nimmerjahn, Petra Ondr\u00e1ckov\u00e1, Francesco S. Pavone, Citlali Perez Campos, Darcy S. Peterka, Filippo Pisano, Ferruccio Pisanello, Francesca Puppo, Bernardo L. Sabatini, Sanaz Sadegh, Sava Sakad\u017eic, Shy Shoham, Sanaya N. Shroff, R. Angus Silver, Ruth R. Sims, Spencer L. Smith, Vivek J. Srinivasan, Martin Thunemann, Lei Tian, Lin Tian, Thomas Troxler, Antoine Valera, Alipasha Vaziri, Sergei A. Vinogradov, Flavia Vitale, Lihong V. Wang, Hana Uhl\u00ed\u0159ov\u00e1, Chris Xu, Changhuei Yang, Mu-Han Yang, Gary Yellen, Ofer Yizhar, Yongxin Zhao
\nNeurophotonics<\/strong><\/em>, 9(S1), 013001 (2022).<\/p>\n

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Adaptive 3D descattering with a dynamic synthesis network<\/strong><\/a>
\nWaleed Tahir, Hao Wang, Lei Tian
\nLight: Science & Applications<\/strong><\/em> 11, 42, 2022.
\n\u2b51<\/strong>\u00a0O<\/em><\/strong><\/span>n the Cover<\/span><\/strong><\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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Roadmap on digital holography
\n<\/strong><\/a>Bahram Javidi, Artur Carnicer, Arun Anand, George Barbastathis, Wen Chen, Pietro Ferraro, J. W. Goodman, Ryoichi Horisaki, Kedar Khare, Malgorzata Kujawinska, Rainer A. Leitgeb, Pierre Marquet, Takanori Nomura, Aydogan Ozcan, YongKeun Park, Giancarlo Pedrini, Pascal Picart, Joseph Rosen, Genaro Saavedra, Natan T. Shaked, Adrian Stern, Enrique Tajahuerce, Lei Tian<\/strong>, Gordon Wetzstein, and Masahiro Yamaguchi
\nOptics Express<\/strong><\/em> Vol. 29, Issue 22, pp. 35078-35118 (2021).<\/p>\n

Review of bio-optical imaging systems with a high space-bandwidth product<\/strong><\/a>
\nJongchan Park, David J. Brady, Guoan Zheng, Lei Tian, Liang Gao
\nAdvanced Photonics<\/strong><\/em>, 3(4), 044001 (2021).<\/p>\n

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Acousto-optic ptychography<\/a><\/strong>
\nM. Rosenfeld, G. Weinberg, D. Doktofsky, Y. Li, L. Tian, O. Katz
\nOptica<\/strong><\/em> 8, 936-943 (2021).<\/span><\/p>\n

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Microsecond fingerprint stimulated Raman spectroscopic imaging by ultrafast tuning and spatial-spectral learning<\/strong><\/a>
\nH. Lin, H.J. Lee, N. Tague, J.-B. Lugagne, C. Zong, F. Deng, J. Shin, L. Tian, W. Wong, M.J. Dunlop, J.-X. Cheng
\n<\/span>Nature Communications<\/strong><\/em>\u00a012(1) (2021).
\n\u2b51 <\/span>In the news:
\n– BU ECE news<\/a>.<\/strong><\/span><\/span><\/p>\n

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Deep Learning in Biomedical Optics<\/a><\/strong>
\nL. Tian, B. Hunt, M. Bell, J. Yi, J. Smith, M. Ochoa, X. Intes, N. Durr
\nLasers in Surgery and Medicine<\/strong><\/em> 53(6), 748, (2021).
\n<\/span>\u2b51<\/strong> O<\/em><\/strong><\/span>n the Cover<\/strong><\/span><\/span><\/p>\n

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Large-scale holographic particle 3D imaging with the beam propagation model<\/strong><\/a>
\nHao Wang, Waleed Tahir, Jiabei Zhu, Lei Tian
\nOpt. Express<\/strong>\u00a0<\/em>29, 17159-17172 (2021)<\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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Single-cell cytometry via multiplexed fluorescence prediction by label-free reflectance microscopy<\/a>
\n<\/strong>Shiyi Cheng, Sipei Fu, Yumi Mun Kim, Weiye Song, Yunzhe Li, Yujia Xue, Ji Yi, Lei Tian
\nScience Advances<\/strong>\u00a0<\/cite>\u00a015 Jan 2021: <\/span>Vol. 7, no. 3, eabe0431
\n<\/span>\u2b51 <\/span>In the news:
\n– BU Hariri Institute: <\/strong>Deep Learning Allows for Digital Labeling of Multiple Cellular Structures<\/a><\/span><\/span><\/p>\n

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Displacement-agnostic coherent imaging through scatter with an interpretable deep neural network<\/strong><\/a>
\nY Li, S Cheng, Y Xue, L Tian
\nOptics Express<\/strong><\/em> Vol. 29, Issue 2, pp. 2244-2257 (2021).<\/p>\n

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Anatomical modeling of brain vasculature in two-photon microscopy by generalizable deep learning<\/strong><\/a>
\nWaleed<\/span>\u00a0<\/span>Tahir<\/span><\/span>,\u00a0<\/span>Sreekanth<\/span>\u00a0<\/span>Kura<\/span><\/span>,\u00a0<\/span>Jiabei<\/span>\u00a0<\/span>Zhu<\/span><\/span>,\u00a0<\/span>Xiaojun<\/span>\u00a0<\/span>Cheng<\/span><\/span>,\u00a0<\/span>Rafat<\/span>\u00a0<\/span>Damseh<\/span><\/span>,\u00a0<\/span>Fetsum<\/span>\u00a0<\/span>Tadesse<\/span><\/span>,\u00a0<\/span>Alex<\/span>\u00a0<\/span>Seibel<\/span><\/span>,\u00a0<\/span>Blaire S.<\/span>\u00a0<\/span>Lee<\/span><\/span>,\u00a0<\/span>Frederic<\/span>\u00a0<\/span>Lesage<\/span><\/span>,\u00a0<\/span>Sava<\/span>\u00a0<\/span>Sakadzic<\/span><\/span>,\u00a0<\/span>David A.<\/span>\u00a0<\/span>Boas<\/span><\/span>,\u00a0<\/span>Lei<\/span>\u00a0<\/span>Tian
\n<\/span><\/span><\/span>BME Frontiers<\/i><\/strong>,<\/span>\u00a0<\/span>vol.\u00a0<\/span>2021<\/span>,<\/span>\u00a0<\/span>Article ID 8620932<\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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Single-Shot 3D Widefield Fluorescence Imaging with a Computational Miniature Mesoscope<\/strong><\/a>
\nYujia Xue, Ian G. Davison, David A. Boas, Lei Tian
\nScience Advances<\/strong><\/em> 21 OCT 2020: EABB7508
\n<\/strong><\/span><\/span>\u2b51<\/strong> O<\/em><\/strong><\/span>n the Cover
\n\u2b51 <\/span>In the news:
\n– BU ENG news: <\/strong>Brain Imaging Scaled Down<\/a>
\n– BU CISE news:<\/strong> How Computational Imaging is Helping to Advance In-Vivo Studies of Brain Function<\/a>
\n<\/span><\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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Single-Shot Ultraviolet Compressed Ultrafast Photography<\/strong><\/a>
\nYingming Lai, Yujia Xue, Christian\u2010Yves C\u00f4t\u00e9, Xianglei Liu, Antoine,Laram\u00e9e, Nicolas Jaouen, Fran\u00e7ois L\u00e9gar\u00e9, Lei Tian, Jinyang Liang
\nLaser & Photonics Reviews<\/strong><\/em> 2020, 14, 2000122.
\n\u2b51<\/strong> <\/em><\/strong><\/span>on the cover story<\/a><\/span><\/strong><\/span><\/span><\/p>\n

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SIMBA: Scalable Inversion in Optical Tomography using Deep Denoising Priors<\/strong><\/a>
\nZihui Wu, Yu Sun, Alex Matlock, Jiaming Liu, Lei Tian, Ulugbek S. Kamilov
\nIEEE Journal of Selected Topics in Signal Processing<\/strong><\/em> 14(6), 2020.<\/p>\n

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Resolution-enhanced intensity diffraction tomography in high numerical aperture label-free microscopy<\/strong><\/a>
\nJiaji Li, Alex Matlock, Yunzhe Li, Qian Chen, Lei Tian, and Chao Zuo
\nPhotonics Research<\/strong> 8(12), 1818-1826 (2020)<\/p>\n

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Diffuser-based computational imaging funduscope<\/strong><\/a>
\nYunzhe Li, Gregory N. McKay, Nicholas J. Durr, Lei Tian
\nOptics Express<\/strong><\/em>\u00a028, 19641-19654 (2020)<\/p>\n

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Comparing the fundamental imaging depth limit of two-photon, three-photon, and non-degenerate two-photon microscopy<\/strong><\/a>
\nXiaojun Cheng, Sanaz Sadegh, Sharvari Zilpelwar, Anna Devor, Lei Tian, and David A. Boas
\nOptics Letters\u00a0<\/strong><\/em>45, pp. 2934-2937 (2020).<\/p>\n

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Plasmonic ommatidia for lensless compound-eye vision<\/strong><\/a>
\nLeonard C. Kogos, Yunzhe Li, Jianing Liu, Yuyu Li, Lei Tian & Roberto Paiella
\nNature Communications<\/em><\/strong> 11: 1637 (2020).
\n\u2b51 <\/em><\/span><\/span>In the news:<\/strong><\/span>
\n– BU ENG news:\u00a0A Bug\u2019s-Eye View<\/a>
\n\u2b51 Highlighted in OPN Optics in 2020: <\/em><\/span><\/span><\/strong><\/span>Plasmonic Computational Compound-Eye Camera<\/span><\/a><\/span>
\n<\/em><\/span><\/span><\/strong><\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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High-Throughput, High-Resolution Interferometric Light Microscopy of Biological Nanoparticles<\/a><\/strong>
\nC. Yurdakul, O. Avci, A. Matlock, A. J Devaux, M. V Quintero, E. Ozbay, R. A Davey, J. H Connor, W C. Karl, L. Tian, M S. U\u0308nlu\u0308
\nACS Nano<\/em><\/strong> 2020, 14, 2, 2002-2013<\/p>\n

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LED array reflectance microscopy for scattering-based multi-contrast imaging<\/strong><\/a>
\nWeiye Song, Alex Matlock, Sipei Fu, Xiaodan Qin, Hui Feng, Christopher V. Gabel, Lei Tian, and Ji Yi
\nOpt. Lett.<\/em><\/strong> 45, 1647-1650 (2020)<\/p>\n

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Design of a high-resolution light field miniscope for volumetric imaging in scattering tissue<\/a><\/strong>
\nYanqin Chen, Bo Xiong, Yujia Xue, Xin Jin, Joseph Greene, and Lei Tian
\nBiomedical Optics Express<\/em><\/strong>. 11, pp. 1662-1678 (2020).<\/p>\n

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Inverse scattering for reflection intensity phase microscopy<\/a><\/strong>
\nAlex Matlock, Anne Sentenac, Patrick C. Chaumet, Ji Yi, and Lei Tian
\nBiomedical Optics Express<\/em><\/strong>. 11, pp. 911-926 (2020)<\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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High-speed in vitro intensity diffraction tomography
\n<\/strong><\/a>Jiaji Li, Alex Matlock, Yunzhe Li, Qian Chen, Chao Zuo, Lei Tian
\nAdvanced Photonics<\/em><\/strong>, 1(6), 066004 (2019).
\n\u2b51<\/strong> <\/em><\/strong><\/span>on the cover story<\/a>
\n\u2b51 Highlighted at\u00a0Programmable LED ring enables label-free 3D tomography for conventional microscopes<\/a><\/span>
\n<\/strong><\/span><\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

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High-throughput, volumetric quantitative phase imaging with multiplexed intensity diffraction tomography
\n<\/strong><\/a>Alex Matlock, Lei Tian
\nBiomed. Opt. Express<\/em><\/strong> 10, pp. 6432-6448 (2019).<\/p>\n

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Deep spectral learning for label-free optical imaging oximetry with uncertainty quantification
\n<\/strong><\/a>Rongrong<\/span>\u00a0Liu<\/span><\/span>,\u00a0Shiyi\u00a0<\/span>Cheng<\/span><\/span>,\u00a0Lei\u00a0<\/span>Tian<\/span><\/span>,\u00a0Ji<\/span>\u00a0Yi
\nLight: Science & Applications<\/em><\/strong>\u00a08: 102 (2019).<\/span><\/span><\/strong><\/p>\n

\"\"<\/p>\n<\/div>\n

Development of a beam propagation method to simulate the point spread function degradation in scattering media<\/strong><\/a>
\nXiaojun Cheng, Yunzhe Li, Jerome Mertz, Sava Sakad\u017ei\u0107, Anna Devor, David A. Boas, Lei Tian
\nOpt. Lett.<\/em><\/strong> 44, 4989-4992 (2019).<\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

\"\"<\/p>\n

Holographic particle-localization under multiple scattering<\/strong><\/a>
\nWaleed Tahir, Ulugbek S. Kamilov, Lei Tian
\nAdvanced Photonics<\/em><\/strong>, 1(3), 036003 (2019).<\/p>\n

\"\"<\/p>\n

Reliable deep learning-based phase imaging with uncertainty quantification<\/strong><\/a>
\nYujia Xue, Shiyi Cheng, Yunzhe Li, Lei Tian
\nOptica<\/em><\/strong>\u00a0<\/span>6, 618-629 (2019)<\/span>.<\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

\n
\n
\n

\"\"<\/p>\n<\/div>\n<\/div>\n<\/div>\n

Deep speckle correlation: a deep learning approach towards scalable imaging through scattering media
\n<\/strong><\/a>Yunzhe Li, Yujia Xue,\u00a0Lei Tian
\nOptica<\/em><\/strong> 5, 1181-1190 (2018).
\n\u2b51<\/strong> Top 5 most cited articles in Optica published in 2018 (Source: Google Scholar)<\/em><\/strong><\/span><\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

\"intro\"<\/p>\n

 <\/p>\n

Deep learning approach to Fourier ptychographic microscopy<\/span><\/strong><\/a>
\nThanh Nguyen, Yujia Xue, Yunzhe Li, Lei Tian, George Nehmetallah
\nOpt. Express<\/em><\/strong> 26, 26470-26484 (2018).<\/p>\n

\"patternAndROI\"<\/p>\n

High-throughput intensity diffraction tomography with a computational microscope
\n<\/strong><\/a>Ruilong Ling, Waleed Tahir, Hsing-Ying Lin, Hakho Lee, and Lei Tian
\nBiomed. Opt. Express<\/em><\/strong> 9, 2130-2141 (2018)<\/p>\n

\u2b51<\/span>\u00a0<\/em><\/span><\/span>Github Project<\/a><\/strong><\/p>\n

\"IDT\"<\/p>\n

Structured illumination microscopy with unknown patterns and a statistical prior<\/a><\/strong>
Li-Hao Yeh, Lei Tian, and Laura Waller
Biomed. Opt. Express<\/em><\/strong> 8, 695-711 (2017).
\"sim\"<\/p>\n

 <\/p>\n

Compressive holographic video
<\/a><\/strong>Zihao Wang, Leonidas Spinoulas, Kuan He, Lei Tian, Oliver Cossairt, Aggelos K. Katsaggelos, and Huaijin Chen
Opt. Express<\/em><\/strong>\u00a025, 250-262 (2017)<\/span>.<\/p>\n

\"dhv\"<\/p>\n

 <\/p>\n

Nonlinear Optimization Algorithm for Partially Coherent Phase Retrieval and Source Recovery
\n<\/a><\/strong>J. Zhong, L. Tian, P. Varma, L. Waller
\nIEEE Transactions on Computational Imaging<\/em><\/strong> 2 (3), 310 – 322 (2016).<\/p>\n

\"\"<\/p>\n

Computational illumination for high-speed in vitro Fourier ptychographic microscopy<\/strong><\/a>
\nL. Tian, Z. Liu, L. Yeh, M. Chen, J. Zhong, L. Waller
\nOptica<\/em><\/strong> 2(10), 904-911 (2015).<\/p>\n

\"InvitroFPM\"<\/p>\n

Computational imaging: Machine learning for 3D microscopy<\/strong><\/a>
\nL. Waller, L. Tian
\nNature<\/em><\/strong>, 523, 416\u2013417 (2015).<\/p>\n

\n
\n
\n
\n

\"\"<\/p>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n

Quantitative differential phase contrast imaging in an LED array microscope<\/strong><\/a>
\nL.\u00a0Tian, L.\u00a0Waller
\nOpt. Express<\/em><\/strong> 23, 11394-11403 (2015).<\/p>\n

\"DPC\"<\/p>\n

3D intensity and phase imaging from light field measurements in an LED array microscope<\/strong><\/a>
\nLei Tian, L. Waller
\nOptica<\/em><\/strong> 2, 104-111 (2015).
\n\u2b51 the 15 Most Cited Articles in Optica published in 2015 (Source: OSA, 2019)<\/em><\/strong><\/span><\/span><\/p>\n

\"\"<\/p>\n

Real-time brightfield, darkfield and phase contrast imaging in an LED array microscope<\/strong><\/a>
\nZ. Liu, Lei Tian, S. Liu, L. Waller
\nJournal of Biomedical Optics<\/em><\/strong>, 19(10), 106002 (2014).<\/p>\n

\"MultiContrast\"<\/p>\n

Multiplexed coded illumination for Fourier Ptychography with an LED array microscope<\/strong><\/a>
\nLei Tian, X. Li, K. Ramchandran, L. Waller
\nBiomedical Optics Express<\/em><\/strong> 5, 2376-2389 (2014).
\n\u2b51<\/strong> the decade\u2019s most highly cited Articles in Biomed. Opt. Express (Source: OSA, 2020)
\n\u2b51 Highly cited (Top 1%) papers between 2008-2018 (source: Web of Science, 2019)<\/em><\/strong><\/span><\/p>\n

\"MultiplexFP\"<\/p>\n

3D differential phase contrast microscopy with computational illumination using an LED array<\/strong><\/a>
\nLei Tian, J. Wang, L. Waller
\nOptics Letters<\/em><\/strong> 39, 1326 – 1329 (2014).<\/p>\n

\"3DDPC\"<\/p>\n<\/div>\n<\/div>\n<\/div>\n

\n
<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

Full publication list at Google Scholar. JOURNAL PUBLICATIONS Transfer-function approach to substrate-enhanced diffraction tomography Tongyu Li, Yi Shen, Dashan Dong, Danchen Jia, Jianpeng Ao, Ji-Xin Cheng, and Lei Tian Optica, 2026. \u2b51\u00a0Github Project Reflection-mode Multi-slice Fourier Ptychographic Tomography J Zhu, T Li, H Wang, Y Shen, G Hu, L Tian IEEE Transactions on Computational Imaging, […]<\/p>\n","protected":false},"author":12228,"featured_media":1284,"parent":0,"menu_order":4,"comment_status":"closed","ping_status":"closed","template":"page-templates\/no-sidebars.php","meta":[],"_links":{"self":[{"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/pages\/133"}],"collection":[{"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/users\/12228"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/comments?post=133"}],"version-history":[{"count":50,"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/pages\/133\/revisions"}],"predecessor-version":[{"id":2561,"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/pages\/133\/revisions\/2561"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/media\/1284"}],"wp:attachment":[{"href":"https:\/\/sites.bu.edu\/tianlab\/wp-json\/wp\/v2\/media?parent=133"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}