{"id":17,"date":"2022-07-20T11:10:43","date_gmt":"2022-07-20T15:10:43","guid":{"rendered":"https:\/\/sites.bu.edu\/mil\/?page_id=17"},"modified":"2026-03-27T09:37:47","modified_gmt":"2026-03-27T13:37:47","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.bu.edu\/mil\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p>For a complete list of publications that includes papers on the arXiv, please see <a href=\"https:\/\/scholar.google.com\/citations?user=CgfpEssAAAAJ&amp;hl=en&amp;authuser=2\">Google Scholar<\/a><\/p>\n<p class=\"app-journal-headersubtitle\"><span style=\"font-size: 11.0pt;\"><strong>23.<\/strong> Tenorio, M., Md, H. R., Mannodi-Kanakkithodi, A., Chapman, J., &#8220;<a href=\"https:\/\/pubs.aip.org\/aip\/cpr\/article-abstract\/7\/1\/011317\/3384237\/Out-of-distribution-machine-learning-for-materials?redirectedFrom=fulltext\"><em>Out-of-distribution machine learning for materials discovery: challenges and opportunities<\/em><\/a>&#8220;, Chemical Physics Reviews, March, 2026 <a href=\"\/mil\/files\/2026\/03\/Out-of-distribution_machine_learning_for_materials.pdf\">PDF<\/a><\/span><\/p>\n<p class=\"app-journal-headersubtitle\"><span style=\"font-size: 11.0pt;\"><strong>22.<\/strong> Kwon, H., Hsu, T., Sun, W., Jeong, W., Aydin, F., Chapman, J., Chen, X., Lordi, V., Carbone, M., Lu, D., &#8220;<a href=\"https:\/\/iopscience.iop.org\/article\/10.1088\/2632-2153\/ad8c10\"><em>Spectroscopy-Guided Discovery of Three-Dimensional Structures of Disordered Materials with Diffusion Models<\/em><\/a>&#8220;, Machine Learning Science and Technology, October, 2024 <a href=\"\/mil\/files\/2024\/10\/Kwonetal_2024_Mach._Learn.3A_Sci._Technol._10.1088_2632-2153_ad8c10.pdf\">PDF<\/a><br \/>\n<\/span><\/p>\n<p class=\"app-journal-headersubtitle\"><span style=\"font-size: 11.0pt;\"><strong>21.<\/strong> Hsu, T., Sadigh, B., Bertin, N., Park, C., Chapman, J., Bulatov, V., Zhou, F., &#8220;<a href=\"https:\/\/www.nature.com\/articles\/s41524-024-01337-z\"><em>Score-based denoising for atomic structure identification<\/em><\/a>&#8220;, npj Computational Materials, July, 2024 <a href=\"\/mil\/files\/2024\/07\/s41524-024-01337-z.pdf\">PDF<\/a><br \/>\n<\/span><\/p>\n<p class=\"app-journal-headersubtitle\"><span style=\"font-size: 11.0pt;\"><strong>20.<\/strong> Grieder, A., Kim, K., Wan, L., Chapman, J., Wood, B. C., Adelstein, N., &#8220;<a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.jpcc.4c00171\"><em>Effects of Nonequilibrium Atomic Structure on Ionic Diffusivity in LLZO: A Classical and Machine Learning Molecular Dynamics Study<\/em><\/a>&#8220;, Journal of Physical Chemistry C, May, 2024 <a href=\"\/mil\/files\/2024\/05\/grieder-et-al-2024-effects-of-nonequilibrium-atomic-structure-on-ionic-diffusivity-in-llzo-a-classical-and-machine.pdf\">PDF<\/a><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>19.<\/strong> Aroboto, B., Chen, S., Hsu, T., Wood, B. C., Jiao, Y., Chapman, J., &#8220;<a href=\"https:\/\/pubs.aip.org\/aip\/apl\/article\/123\/9\/094103\/2909293\/Universal-and-interpretable-classification-of\"><em>Universal and interpretable classification of atomistic structural transitions via unsupervised graph learning<\/em><\/a>&#8220;, Applied Physics Letters, September 2023 <a href=\"\/mil\/files\/2023\/09\/094103_1_5.0156682.pdf\">PDF<\/a><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>18.<\/strong> Chapman, J., Hsu, T., Chen, X., Heo, T. W., Wood, B. C., &#8220;<a href=\"https:\/\/www.nature.com\/articles\/s41467-023-39755-0\"><em>Quantifying Disorder One Atom at a Time Using an Interpretable Graph Neural Network Paradigm<\/em><\/a>&#8220;, Nature Communications, July 2023 <a href=\"\/mil\/files\/2023\/07\/s41467-023-39755-0.pdf\">PDF<\/a><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>17.<\/strong> Chapman, J., Kweon, K. E., Zhu, Y., Bushick, K., Bayu, L., Colla, C., Mason, H., Goldman, N., Keilbart, N., Qui, R., Heo, T. W., Rodriguez, J., Wood., B. C., &#8220;<a href=\"https:\/\/pubs.rsc.org\/en\/Content\/ArticleLanding\/2023\/TA\/D2TA07075H\" style=\"font-size: 11pt;\"><em>Hydrogen in Disordered Titania: Connecting Local Chemistry, Structure, and Stoichiometry through Accelerated Exploration<\/em><\/a><span style=\"font-size: 11pt;\">&#8220;, Journal of Materials Chemistry A, February 2023 <\/span><a href=\"\/mil\/files\/2023\/03\/d2ta07075h.pdf\" style=\"font-size: 11pt;\">PDF<\/a><span style=\"font-size: 11.0pt;\"><\/span><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>16.<\/strong> Zhu, Y., Heo, T. W., Rodriguez, J., Weber, P., Shi, R., Baer, B., Morgado, F., Antonov, S., Kweon, K., Watkins, E., Savage, D., Chapman, J., Keilbart, N., Song, Y., Zhen, Q., Gault, B., Vogel, S., Sen-Britain, S., Shalloo, M., Orme, C., Hansen, M., Hahn, C., Pham, T. A., Macdonald, D., Qui, S. R., Wood, B. C., \u201c<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1359028622000407\"><i>Hydriding of titanium: Recent trends and perspectives in advanced characterization and multiscale modeling<\/i><\/a>\u201d, Current Opinion in Solid State &amp; Materials Science, 101020, July 2022 <a href=\"\/mil\/files\/2023\/03\/1-s2.0-S1359028622000407-main.pdf\">PDF<\/a><o:p><\/o:p><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>15.<\/strong> Hsu, T., Weitzner, S., Keilbart, N., Chapman, J., Xiao, P., Pham, T. A., Chen, X., Qiu, R., Wood, B., \u201c<a href=\"https:\/\/www.nature.com\/articles\/s41524-022-00841-4\"><em>An Efficient, Interpretable Atomistic Graph Neural Network Representation for Angle-dependent Properties and its Applications to Optical-Spectroscopy Prediction<\/em><\/a>\u201d, npj Computational Materials, vol. 8, no. 151, July 2022 <a href=\"\/mil\/files\/2023\/03\/s41524-022-00841-4-6.pdf\">PDF<\/a><o:p><\/o:p><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>14.<\/strong> Chapman, J., Goldman, N., \u201c<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0927025622003639\"><em>Characterizing the Atomistic Free-volume Morphology of Materials with Graph Theory<\/em><\/a>\u201d, Computational Materials Science, vol. 213, July 2022 <a href=\"\/mil\/files\/2023\/03\/1-s2.0-S0927025622003639-main.pdf\">PDF<\/a><o:p><\/o:p><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>13.<\/strong> Chapman, J., Goldman, N., Wood, B., \u201c<a href=\"https:\/\/www.nature.com\/articles\/s41524-022-00717-7\"><em>Efficient and Universal Characterization of Atomic Structures Through a Topological Graph Order Parameter<\/em><\/a>\u201d, npj Computational Materials, vol. 8, no. 37, March 2022 <a href=\"\/mil\/files\/2023\/03\/s41524-022-00717-7-1.pdf\">PDF<\/a><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>12.<\/strong> Bergh, W., Wechsler, S., Lokupitiya, H., Jarocha, L., Kim, K., Chapman, J., Kweon, K. E., Wood., B., Heald, S., Stefik, M., <i style=\"font-size: 11pt;\">\u201c<a href=\"https:\/\/chemistry-europe.onlinelibrary.wiley.com\/doi\/full\/10.1002\/batt.202200056\">Amorphization of T-Nb2O5 Accelerates Intercalation Pseudocapacitance via Faster Lithium Diffusivity Revealed using Tunable Isomorphic Architectures<\/a>\u201d<\/i><span style=\"font-size: 11pt;\">, Batteries and Supercaps, February 2022 <\/span><a href=\"\/mil\/files\/2023\/03\/Batteries-Supercaps-2022-Bergh-Amorphization-of-Pseudocapacitive-T-Nb2O5-Accelerates-Lithium-Diffusivity-as.pdf\" style=\"font-size: 11pt;\">PDF<\/a><span style=\"font-size: 11.0pt;\"><\/span><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>11.<\/strong> Chapman, J., Ramprasad, R., \u201c<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s11837-020-04385-0\"><em>Multi-scale Modelling of Defect Phenomena in Platinum Using Machine Learning Force Fields<\/em><\/a>\u201d, The Journal of the Minerals, Metals &amp; Materials Society, vol. 72, no. 12, October 2020 <a href=\"\/mil\/files\/2023\/03\/s11837-020-04385-0.pdf\">PDF<\/a><o:p><\/o:p><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>10.<\/strong> Chapman, J., Ramprasad, R., \u201c<a href=\"https:\/\/pubs.acs.org\/doi\/full\/10.1021\/acs.jpcc.0c05512\"><em>Nanoscale Modelling of Surface Phenomena in Aluminum Using Machine Learning Force Fields<\/em><\/a>\u201d, Journal of Physical Chemistry C, vol. 124, no. 40, September 2020 <a href=\"\/mil\/files\/2023\/03\/acs.jpcc_.0c05512.pdf\">PDF<\/a><o:p><\/o:p><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>9.<\/strong> Chapman, J., Ramprasad, R., \u201c<a href=\"https:\/\/aip.scitation.org\/doi\/full\/10.1063\/5.0008955\"><em>Predicting the Dynamic Behavior of the Mechanical Properties of Platinum with Machine Learning<\/em><\/a>\u201d, Journal of Chemical Physics, vol. 152, no. 22, June 2020 <a href=\"\/mil\/files\/2023\/03\/5.0008955.pdf\">PDF<\/a><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>8.<\/strong> Chapman, J., Batra, R., Ramprasad, R., \u201c<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0927025619307827\" style=\"font-size: 11pt;\"><em>Machine Learning Models for the Prediction of Energy, Forces, and Stresses for Platinum<\/em><\/a><span style=\"font-size: 11pt;\">\u201d, Computational Materials Science, vol. 174, March 2020 <\/span><a href=\"\/mil\/files\/2023\/03\/1-s2.0-S0927025619307827-main.pdf\" style=\"font-size: 11pt;\">PDF<\/a><span style=\"font-size: 11.0pt;\"><\/span><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>7.<\/strong> Huan, T.D., Batra, R., Chapman, J., Kim, C., Chandrasekaran, A., Ramprasad, R., \u201c<a href=\"https:\/\/pubs.acs.org\/doi\/full\/10.1021\/acs.jpcc.9b04207\"><em>Iterative-learning Strategy for the Development of Application-specific Atomistic Force Fields<\/em><\/a>\u201d, Journal of Physical Chemistry C, vol. 123, no. 34, August 2019 <a href=\"\/mil\/files\/2023\/03\/acs.jpcc_.9b04207.pdf\">PDF<\/a><o:p><\/o:p><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>6.<\/strong> Batra, R., Huan, T.D., Kim, C., Chapman, J., Chen, L., Chandrasekaran, A., Ramprasad, R., \u201c<a href=\"https:\/\/pubs.acs.org\/doi\/full\/10.1021\/acs.jpcc.9b03925\"><em>General Atomic Neighborhood Fingerprint for Machine Learning-based Methods<\/em><\/a>\u201d, Journal of Physical Chemistry C, vol. 123, no. 25, June 2019 <a href=\"\/mil\/files\/2023\/03\/acs.jpcc_.9b03925.pdf\">PDF<\/a><o:p><\/o:p><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p class=\"app-journal-headersubtitle\"><span style=\"font-size: 11.0pt;\"><strong>5.<\/strong> Chapman, J., Batra, R., Uberuaga, B.P., Pilania, G., Ramprasad, R., \u201c<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0927025618307602\"><em>A Comprehensive Computational Study of Adatom Diffusion on the Aluminum (1 0 0) Surface<\/em><\/a>\u201d, Computational Materials Science, vol. 158, February 2019 <a href=\"\/mil\/files\/2023\/03\/1-s2.0-S0927025618307602-main.pdf\">PDF<\/a><\/span><\/p>\n<p class=\"app-journal-headersubtitle\"><span style=\"font-size: 11.0pt;\"><a href=\"\/mil\/files\/2023\/03\/1-s2.0-S0927025618307602-main.pdf\"><\/a><o:p><\/o:p><\/span><strong><\/strong><strong><\/strong><strong><\/strong><span style=\"font-size: 11.0pt;\"><strong>4.<\/strong> Chapman, J., Foos, J., Nelson, A., Hartung, E., Williams, A., \u201c<a href=\"https:\/\/www.researchgate.net\/publication\/324362787_Pairwise_Disagreements_of_Kekule_Clar_and_Fries_Numbers_for_Benzenoids_A_Mathematical_and_Computational_Investigation\"><em>Pairwise disagreements of Kekul\u00e9, Clar, and Fries Numbers for Benzenoids: a Mathematical and Computational Investigation<\/em><\/a>\u201d, Communications in Mathematical and Computer Chemistry, vol. 80, no. 1, February 2018 <a href=\"\/mil\/files\/2023\/03\/KFCPaper.pdf\">PDF<\/a><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>3.<\/strong> Huan, T.D., Batra, R., Chapman, J., Krishnan, S., Chen, L., Chandrasekaran, A., Ramprasad, R., \u201c<a href=\"https:\/\/www.nature.com\/articles\/s41524-017-0042-y\"><em>A Universal Strategy for the Creation of Machine Learning-based Atomistic Force Fields<\/em><\/a>\u201d, npj Computational Materials, vol. 3, no. 1, September 2017 <a href=\"\/mil\/files\/2023\/03\/s41524-017-0042-y.pdf\">PDF<\/a><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>2.<\/strong> Botu, V., Chapman, J., Ramprasad, R., \u201c<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0927025616306218\"><em>A Study of Adatom Ripening on an Al (1 1 1) Surface with Machine Learning Force Fields<\/em><\/a>\u201d, Computational Materials Science, vol. 129, March 2017 <a href=\"\/mil\/files\/2023\/03\/1-s2.0-S0927025616306218-main.pdf\">PDF<\/a><\/span><span style=\"font-size: 11.0pt;\"><\/span><span style=\"font-size: 11.0pt;\"><\/span><\/p>\n<p><span style=\"font-size: 11.0pt;\"><strong>1.<\/strong> Botu, V., Batra, R., Chapman, J., Ramprasad, R., \u201c<a href=\"https:\/\/pubs.acs.org\/doi\/full\/10.1021\/acs.jpcc.6b10908\"><em>Machine Learning Force Fields: Construction, Validation, and Outlook<\/em><\/a>\u201d, Journal of Physical Chemistry C, vol. 121, no. 1, December 2016 <a href=\"\/mil\/files\/2023\/03\/acs.jpcc_.6b10908.pdf\">PDF<\/a><o:p><\/o:p><\/span><\/p>\n","protected":false},"excerpt":{"rendered":"<p>For a complete list of publications that includes papers on the arXiv, please see Google Scholar 23. Tenorio, M., Md, H. R., Mannodi-Kanakkithodi, A., Chapman, J., &#8220;Out-of-distribution machine learning for materials discovery: challenges and opportunities&#8221;, Chemical Physics Reviews, March, 2026 PDF 22. Kwon, H., Hsu, T., Sun, W., Jeong, W., Aydin, F., Chapman, J., Chen, [&hellip;]<\/p>\n","protected":false},"author":21170,"featured_media":0,"parent":0,"menu_order":4,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/pages\/17"}],"collection":[{"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/users\/21170"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/comments?post=17"}],"version-history":[{"count":50,"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/pages\/17\/revisions"}],"predecessor-version":[{"id":498,"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/pages\/17\/revisions\/498"}],"wp:attachment":[{"href":"https:\/\/sites.bu.edu\/mil\/wp-json\/wp\/v2\/media?parent=17"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}