{"id":16,"date":"2016-07-21T13:12:42","date_gmt":"2016-07-21T17:12:42","guid":{"rendered":"https:\/\/sites.bu.edu\/brainlab\/?page_id=16"},"modified":"2026-03-24T12:11:54","modified_gmt":"2026-03-24T16:11:54","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.bu.edu\/brainlab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p>&nbsp;<\/p>\n<p style=\"text-align: left;\">Complete List of Published Work in:\u00a0 \u00a0<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/myncbi\/vasileios.zikopoulos.1\/bibliography\/public\/\">My Bibliography<\/a>\u00a0 or\u00a0\u00a0<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/myncbi\/browse\/collection\/45145582\/?sort=date&amp;direction=descending\">Pubmed Bibliography Page<\/a>\u00a0\u00a0 or \u00a0\u00a0<a href=\"https:\/\/scholar.google.com\/citations?user=4NBWph8AAAAJ&amp;hl=en\" title=\"B. Zikopoulos\">Google Scholar Page<\/a><\/p>\n<p>&nbsp;<\/p>\n<h4>1. Networks for flexible behavior and attention in the thalamus, amygdala, and cortex<\/h4>\n<hr \/>\n<ul>\n<li>Barbas H, Zikopoulos B, John YJ. The inevitable inequality of cortical columns. <em><a href=\"https:\/\/www.frontiersin.org\/journals\/systems-neuroscience\/articles\/10.3389\/fnsys.2022.921468\/full\">Front Syst Neurosci.<\/a><\/em> 2022 Sep 20;16:921468. doi: <a href=\"https:\/\/doi.org\/10.3389\/fnsys.2022.921468\">10.3389\/fnsys.2022.921468<\/a>. PMID: 36203745; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC9532056\/\">PMC9532056<\/a>.\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.frontiersin.org\/journals\/systems-neuroscience\/articles\/10.3389\/fnsys.2022.921468\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Timbie C<sup>#<\/sup>, Garc\u00eda-Cabezas M\u00c1<sup>#<\/sup>, Zikopoulos B<sup>#<\/sup>, Barbas H. (2020). Organization of primate amygdalar\u2013thalamic pathways for emotions. <a href=\"https:\/\/doi.org\/10.1371\/journal.pbio.3000639\"><em>PLoS Biology<\/em><\/a> 18(2): e3000639. (<sup>#<\/sup> co-first authors). PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc7064256\/\">PMC7064256<\/a>\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/journals.plos.org\/plosbiology\/article\/file?id=10.1371\/journal.pbio.3000639&amp;type=printable\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>John YJ, Zikopoulos B, Bullock D and Barbas H. (2018). Visual attention deficits in schizophrenia can arise from inhibitory dysfunction in thalamus or cortex. <a href=\"https:\/\/doi.org\/10.1162\/cpsy_a_00023\"><em>Computational Psychiatry<\/em><\/a>. 2, 223\u2013257. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6317791\/\">PMC6317791<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"http:\/\/www.mitpressjournals.org\/doi\/pdf\/10.1162\/cpsy_a_00023\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Zikopoulos B, Hoistad M, John YJ, Barbas H. (2017). Posterior orbitofrontal and anterior cingulate cortices target inhibitory and excitatory systems with opposite functions in the amygdala. <a href=\"https:\/\/doi.org\/10.1523\/jneurosci.3940-16.2017\"><em>Journal of Neuroscience<\/em><\/a><em>.<\/em> Apr 14. pii: 3940-16. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc5444191\/\">PMC5444191<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.jneurosci.org\/content\/jneuro\/37\/20\/5051.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Zikopoulos B, John YJ, Garc\u00eda-Cabezas M\u00c1, Bunce JG and Barbas H. (2016) The intercalated nuclear complex of the primate amygdala. <a href=\"https:\/\/doi.org\/10.1016\/j.neuroscience.2016.05.052\"><em>Neuroscience<\/em><\/a><em>.<\/em> 330:267-290. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc4928580\/\">PMC4928580<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2016_IMamygdala-ZikopoulosEtAl-Neuroscience2016.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>John YJ<sup>#<\/sup>, Zikopoulos B<sup>#<\/sup>, Bullock D and Barbas H. (2016). The Emotional Gatekeeper: A computational model of attentional selection and suppression through the projection from the amygdala to the thalamic reticular nucleus. <a href=\"https:\/\/doi.org\/10.1371\/journal.pcbi.1004722\"><em>PLoS Computational Biology<\/em><\/a><em>. <\/em>12(2): e1004722. (<sup>#<\/sup> co-first authors). PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc4734702\/\">PMC4734702<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/journals.plos.org\/ploscompbiol\/article\/file?id=10.1371\/journal.pcbi.1004722&amp;type=printable\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Halassa MM, Chen Z, Wimmer RD, Brunetti PM, Zhao S, Zikopoulos B, Wang F, Brown EN and Wilson MA. (2014). State-dependent architecture of thalamic reticular subnetworks. <a href=\"https:\/\/doi.org\/10.1016\/j.cell.2014.06.025\"><em>Cell<\/em><\/a><em>.<\/em> 158(4):808-21. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc4205482\/\">PMC4205482<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/www.cell.com\/cell\/pdfExtended\/S0092-8674(14)00815-0\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Bunce JG, Zikopoulos B, Feinberg M, and Barbas H. (2013). Parallel prefrontal pathways reach distinct excitatory and inhibitory systems in memory-related rhinal cortices. <a href=\"https:\/\/doi.org\/10.1002\/cne.23413\"><em>Journal of Comparative Neurology<\/em><\/a><em>. <\/em>Dec 15;521(18):4260-83. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc3881238\/\">PMC3881238<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2013_BunceZikopoulosFeinbergBarbas-RhinalCortex-JCN2013.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>John YJ, Bullock D, Zikopoulos B, Barbas H. (2013). Anatomy and computational modeling of networks underlying cognitive-emotional interaction. <\/span><a href=\"https:\/\/doi.org\/10.3389\/fnhum.2013.00101\"><em>Frontiers in Human Neuroscience<\/em><\/a><span>. 7:101. <\/span>PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc3613599\/\">PMC3613599<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fnhum.2013.00101\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Barbas H, Garc\u00eda-Cabezas MA, and Zikopoulos B. (2013). Frontal-thalamic circuits associated with language. <\/span><a href=\"https:\/\/doi.org\/10.1016\/j.bandl.2012.10.001\"><em>Brain and Language<\/em><\/a><span>. <\/span>Jul; 126(1):49-61. Epub 2012 Dec 1. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc3615046\/\">PMC3615046<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2012_BarbasEtAl-BrainLanguage.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Zikopoulos B and Barbas H. (2012). Pathways for emotions and attention converge on the thalamic reticular nucleus in primates. <\/span><a href=\"https:\/\/doi.org\/10.1523\/jneurosci.4793-11.2012\"><em>Journal of Neuroscience<\/em><\/a><span>. 32(15): 5338-5350. <\/span>PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc3342673\/\">PMC3342673<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.jneurosci.org\/content\/jneuro\/32\/15\/5338.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Barbas H, Zikopoulos B, and Timbie C. (2011). Sensory pathways and emotional context for action in primate prefrontal cortex. <\/span><a href=\"https:\/\/doi.org\/10.1016\/j.biopsych.2010.08.008\"><em>Biological Psychiatry<\/em><\/a><span><em>.<\/em><\/span><span> 69(12): 1133-1139. <\/span>PMID:\u00a020889144\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2010_14936-Barbas-Zikopoulos-Timbie.-Biol-Psychiatry.-2010.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Xiao D, Zikopoulos B, and Barbas H.<\/span><span> (2009). Laminar and modular organization of prefrontal projections to multiple thalamic nuclei<\/span>. <a href=\"https:\/\/doi.org\/10.1016\/j.neuroscience.2009.04.034\"><em>Neuroscience<\/em><\/a>. 161(4): 1067-1081. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc2700123\/\">PMC2700123<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2010_13257-Xiao-Zikopoulos-Barbas.-Neuroscience-2010.-Laminar-and-modular-organization-of-prefrontal-projections-to-multiple-thalamic-nuclei-.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Zikopoulos B and Barbas H. (2007). Parallel driving and modulatory pathways link the prefrontal cortex and thalamus. <a href=\"https:\/\/doi.org\/10.1371\/journal.pone.0000848\"><em>PLoS ONE<\/em><\/a> 2(9): e848. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc1952177\/\">PMC1952177<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/journals.plos.org\/plosone\/article\/file?id=10.1371\/journal.pone.0000848&amp;type=printable\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Barbas H and Zikopoulos B<\/span><span>. (2007). The prefrontal cortex and flexible behavior<\/span>. <a href=\"https:\/\/doi.org\/10.1177\/1073858407301369\"><em>The Neuroscientist<\/em><\/a>. 13(5): 532-545. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc2855184\/\">PMC2855184<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2007-The-prefrontal-cortex-and-flexible-behavior.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Zikopoulos B and Barbas H. (2007). <span>Circuits for multisensory integration and attentional modulation through the prefrontal cortex and the thalamic reticular nucleus in primates. <\/span><a href=\"https:\/\/doi.org\/10.1515\/revneuro.2007.18.6.417\"><em>Reviews in the Neurosciences<\/em><\/a><span><em>. <\/em><\/span><span>18(6): 417-438. <\/span>PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc2855189\/\">PMC2855189<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"\/brainlab\/files\/2020\/07\/2007-Circuits-for-multisensory-integration-and-attentional-modulation-through-the-prefrontal-cortex-and-the-thalamic-reticular-nucleus-ReviewFixed-LowRes.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Zikopoulos B and Barbas H. (2006). Prefrontal projections to the thalamic reticular nucleus form a unique circuit for attentional mechanisms. <a href=\"https:\/\/doi.org\/10.1523\/jneurosci.5511-05.2006\"><em>Journal of Neuroscience<\/em><\/a><em>.<\/em> 26(28): 7348-7361. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6674204\/\">PMC6674204<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/www.jneurosci.org\/content\/jneuro\/26\/28\/7348.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Barbas H, Medalla M, Alade O, Suski J, Zikopoulos B, and Lera P. (2005). Relationship of prefrontal connections to inhibitory systems in superior temporal areas in the rhesus monkey. <a href=\"https:\/\/doi.org\/10.1093\/cercor\/bhi018\"><em>Cerebral Cortex<\/em><\/a><em>.<\/em> 15(9): 1356-1370. PMID:\u00a015635060\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/academic.oup.com\/cercor\/article-pdf\/15\/9\/1356\/814039\/bhi018.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<p>&nbsp;<\/p>\n<h4>2. Comparative studies of brain networks in humans, non-human primates, and other animal models: a template for study of disorders<\/h4>\n<hr \/>\n<ul>\n<li><span>Barbas H, Zikopoulos B. The Cortical Structural Model Extends to Thalamocortical Connections. <a href=\"https:\/\/doi.org\/10.1111\/ejn.70167\"><em>European Journal of Neuroscience<\/em><\/a>. 2025 Jun;61(12):e70167. doi: <a href=\"https:\/\/doi.org\/10.1111\/ejn.70167\">10.1111\/ejn.70167<\/a>. PMID: 40542691; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12723798\/\">PMC12723798<\/a>.<\/span> \u00a0 \u00a0 <a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/epdf\/10.1111\/ejn.70167\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span>Bautista J, Garc\u00eda-Cabezas M\u00c1, Medalla M, Rosene DL, Zikopoulos B, Barbas H. Pattern of ventral temporal lobe interconnections in rhesus macaques. <a href=\"https:\/\/doi.org\/10.1002\/cne.25550\"><em>Journal of Comparative Neurology<\/em><\/a>. 2023 Dec;531(18):1963-1986. doi: <a href=\"https:\/\/doi.org\/10.1002\/cne.25550\">10.1002\/cne.25550<\/a>. Epub 2023 Nov 2. PMID: 37919833; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC11142421\/\">PMC11142421<\/a>.<\/span> \u00a0 \u00a0 \u00a0 <a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/epdf\/10.1002\/cne.25550\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Zikopoulos B, Matuk N, Romanova I, Yazdanbakhsh A. Biophysical Modeling of Thalamocortical Circuit Dynamics: Species-Specific Insights into Neural Synchrony, Sleep Spindles, and Mechanisms of Neuropsychiatric Disorders. <a href=\"https:\/\/doi.org\/10.64898\/2026.02.01.703170\"><em>bioRxiv<\/em> <\/a>[Preprint]. 2026 Feb 3:2026.02.01.703170. doi: <a href=\"https:\/\/doi.org\/10.64898\/2026.02.01.703170\">10.64898\/2026.02.01.703170<\/a>. PMID: 41676473; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12889456\/\">PMC12889456<\/a>. \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.64898\/2026.02.01.703170v1.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Garc\u00eda-Cabezas M\u00c1, Hacker JL, Zikopoulos B. Homology of neocortical areas in rats and primates based on cortical type analysis: an update of the Hypothesis on the Dual Origin of the Neocortex. <a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00429-022-02548-0\"><em>Brain Struct Funct.<\/em><\/a> 2023 <span>Jun;228(5):1069-1093. <\/span>doi: <a href=\"https:\/\/doi.org\/10.1007\/s00429-022-02548-0\">10.1007\/s00429-022-02548-0<\/a>. <span class=\"identifier pmc\"><span class=\"id-label\">PMCID:<span>\u00a0<\/span><\/span><a class=\"id-link\" target=\"_blank\" rel=\"noopener noreferrer\" ref=\"linksrc=article_id_link&amp;article_id=PMC9922339&amp;id_type=PMC\" href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC9922339\/\" data-ga-category=\"full_text\" data-ga-action=\"PMCID\">PMC9922339<\/a><\/span>\u00a0 \u00a0 \u00a0 \u00a0 <a href=\"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00429-022-02548-0.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>John YJ, Zikopoulos B, Garc\u00eda-Cabezas M\u00c1, Barbas H. The cortical spectrum: A robust structural continuum in primate cerebral cortex revealed by histological staining and magnetic resonance imaging. <a href=\"https:\/\/www.frontiersin.org\/journals\/neuroanatomy\/articles\/10.3389\/fnana.2022.897237\/full\"><em>Front Neuroanat.<\/em><\/a> 2022 Sep 9;16:897237. doi: <a href=\"https:\/\/doi.org\/10.3389\/fnana.2022.897237\">10.3389\/fnana.2022.897237<\/a>. PMID: 36157324; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC9501703\/\">PMC9501703<\/a>. \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.frontiersin.org\/journals\/neuroanatomy\/articles\/10.3389\/fnana.2022.897237\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Wang, Y., Taylor, E., Zikopoulos, B., Seta, F., Huang, N., Hamilton, J.A., Kantak, K.M., Morgan, K.G. (2020). Aging-induced Microbleeds of the Mouse Thalamus Compared to Sensorimotor and Memory Defects. <em><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0197458020304073?via%3Dihub\">Neurobiol Aging<\/a><\/em>. 2020 Dec 9;100:39-47. doi: 10.1016\/j.neurobiolaging.2020.11.017. [Epub ahead of print] PubMed PMID: 33477010. \u00a0 \u00a0 \u00a0 <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0197458020304073\/pdfft?md5=b9ebb4cd2b1415c201c14f0a06698561&amp;pid=1-s2.0-S0197458020304073-main.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Garc\u00eda-Cabezas M\u00c1, Hacker JL, and Zikopoulos B. (2020). A protocol for cortical type analysis of the human neocortex applied on histological samples, the Atlas of von Economo and Koskinas, and Magnetic Resonance Imaging. <a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fnana.2020.576015\/full\"><em>Frontiers in Neuroanatomy<\/em><\/a>. <span><span>14:576015. doi: 10.3389\/fnana.2020.576015<\/span><\/span>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fnana.2020.576015\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<ul><\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Garc\u00eda-Cabezas M\u00c1, Zikopoulos B. (2019). Evolution, development, and organization of the cortical connectome. <a href=\"https:\/\/doi.org\/10.1371\/journal.pbio.3000259\"><em>PLoS Biology<\/em><\/a>. <em>May 10;17(5):e3000259. eCollection 2019 May<\/em>. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6530863\/\">PMC6530863<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/journals.plos.org\/plosbiology\/article\/file?id=10.1371\/journal.pbio.3000259&amp;type=printable\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Garc\u00eda-Cabezas M\u00c1, Zikopoulos B, Barbas H. (2019). The Structural Model: a theory linking connections, plasticity, pathology, development and evolution of the cerebral cortex. <a href=\"https:\/\/doi.org\/10.1007\/s00429-019-01841-9\"><em>Brain Structure and Function<\/em><\/a><em>. <\/em>Feb 9. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6500485\/\">PMC6500485<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2019_BSF_Garc\u00eda-CabezasEtAl_TheStructuralModel.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Zikopoulos B, Garc\u00eda-Cabezas M\u00c1, Barbas H. (2018). Parallel trends in cortical gray and white matter architecture and connections in primates allow fine study of pathways in humans and reveal network disruptions in autism. <a href=\"https:\/\/doi.org\/10.1371\/journal.pbio.2004559\"><em>PLoS Biology<\/em><\/a>. Feb 5;16(2):e2004559. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc5814101\/\">PMC5814101<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/journals.plos.org\/plosbiology\/article\/file?id=10.1371\/journal.pbio.2004559&amp;type=printable\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Garc\u00eda-Cabezas MA, Joyce MKP, John YJ, Zikopoulos B, and Barbas H. (2017). Mirror trends of plasticity and stability indicators in primate prefrontal cortex. <a href=\"https:\/\/doi.org\/10.1111\/ejn.13706\"><em>European Journal of Neuroscience<\/em><\/a><em>.<\/em> 2017 Oct;46 (8):2392-2405. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc5656436\/\">PMC5656436<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2017_Garcia-Cabezas_et_al-2017-European_Journal_of_Neuroscience.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Barbas H and Zikopoulos B<\/span><span>. (2014). Towards patient-specific targeting and parameter setting of deep brain stimulation for relief of depression<\/span>. <a href=\"https:\/\/doi.org\/10.1016\/j.biopsych.2014.09.012\"><em>Biological Psychiatry<\/em><\/a>. 76(12):914-6. PMID:\u00a025454067\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"\/brainlab\/files\/2020\/07\/2014_Barbas-Zikopoulos2014-BPS.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<ul><\/ul>\n<p>&nbsp;<\/p>\n<h4><strong>3. Neuropathology and biomarkers of autism spectrum disorders\u00a0 \u00a0 \u00a0<\/strong><\/h4>\n<hr \/>\n<ul>\n<li><span>Yazdanbakhsh A, Dang KTM, Kuang K, Lian T, Liu X, Xie S, Zikopoulos B. Artificial Intelligence Networks Combining Histopathology and Machine Learning Can Extract Axon Pathology in Autism Spectrum Disorder. <em><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/aur.70135\">Autism Research<\/a><\/em>. 2025 Nov;18(11):2210-2230. doi: <a href=\"https:\/\/doi.org\/10.1002\/aur.70135\">10.1002\/aur.70135<\/a>. Epub 2025 Nov 3. PMID: 41178535; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12661275\/\">PMC12661275<\/a>. <\/span><span class=\"identifier pmc\"><\/span>\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/epdf\/10.1002\/aur.70135\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span>Lokray S, Zikopoulos B, Yazdanbakhsh A. Structural changes in autism reflect atypical brain network organization and phenotypical heterogeneity: a hybrid deep network approach. <em><a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2025.11.02.686152v2\">bioRxiv<\/a> <\/em>[Preprint]. 2025 Dec 3:2025.11.02.686152. doi: <a href=\"https:\/\/doi.org\/10.1101\/2025.11.02.686152\">10.1101\/2025.11.02.686152<\/a>. PMID: 41377502; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12687778\/\">PMC12687778<\/a>.<\/span> \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2025.11.02.686152v2.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Park S, Zikopoulos B, Yazdanbakhsh A. (2022). Visual illusion susceptibility in autism: A neural model. <em><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/ejn.15739\">European Journal of Neuroscience<\/a><\/em>, 1-20. 2022 Jun 14. doi:<span class=\"identifier doi\"><span class=\"id-label\"><span>\u00a0<\/span><\/span><a class=\"id-link\" target=\"_blank\" rel=\"noopener noreferrer\" ref=\"linksrc=article_id_link&amp;article_id=10.1111\/ejn.15739&amp;id_type=DOI\" href=\"https:\/\/doi.org\/10.1111\/ejn.15739\" data-ga-category=\"full_text\" data-ga-action=\"DOI\">10.1111\/ejn.15739<\/a>.<\/span> <span class=\"identifier pmc\"><span class=\"id-label\">PMCID:<span>\u00a0<\/span><\/span><a class=\"id-link\" target=\"_blank\" rel=\"noopener noreferrer\" ref=\"linksrc=article_id_link&amp;article_id=PMC9541695&amp;id_type=PMC\" href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC9541695\/\" data-ga-category=\"full_text\" data-ga-action=\"PMCID\">PMC9541695<\/a><\/span>\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/epdf\/10.1111\/ejn.15739\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Liu X, Bautista J, Liu E, Zikopoulos B. (2020). Imbalance of laminar-specific excitatory and inhibitory circuits of the orbitofrontal cortex in autism. <em><a href=\"https:\/\/molecularautism.biomedcentral.com\/articles\/10.1186\/s13229-020-00390-x\">Molecular Autism<\/a><\/em>. 2020 Oct 20;11(1):83. doi: 10.1186\/s13229-020-00390-x. <span class=\"identifier pmc\"><span class=\"id-label\">PMCID:<span>\u00a0<\/span><\/span><a class=\"id-link\" target=\"_blank\" rel=\"noopener noreferrer\" ref=\"linksrc=article_id_link&amp;article_id=PMC7574354&amp;id_type=PMC\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc7574354\/\" data-ga-category=\"full_text\" data-ga-action=\"PMCID\">PMC7574354<\/a><\/span>\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/molecularautism.biomedcentral.com\/track\/pdf\/10.1186\/s13229-020-00390-x.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Trutzer IM, Garc\u00eda-Cabezas M\u00c1, Zikopoulos B. (2019). Postnatal development and maturation of layer 1 in the lateral prefrontal cortex and its disruption in autism. <a href=\"https:\/\/doi.org\/10.1186\/s40478-019-0684-8\"><em>Acta Neuropathologica Communications<\/em><\/a><em>. Mar 13;7(1):40. <\/em>PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6417186\/\">PMC6417186<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/actaneurocomms.biomedcentral.com\/track\/pdf\/10.1186\/s40478-019-0684-8\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Zikopoulos B, Liu X, Tepe J, Trutzer I, John YJ, Barbas H. (2018). Opposite development of short- and long-range anterior cingulate pathways in autism. <a href=\"https:\/\/doi.org\/10.1007\/s00401-018-1904-1\"><em>Acta Neuropathologica<\/em><\/a><em>. <\/em>Sep 6. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6208731\/\">PMC6208731<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00401-018-1904-1.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Garc\u00eda-Cabezas M\u00c1, Barbas H, Zikopoulos B. (2018). Parallel development of chromatin patterns, neuron morphology, and connections: potential for disruption in autism. <a href=\"https:\/\/doi.org\/10.3389\/fnana.2018.00070\"><em>Frontiers in Neuroanatomy<\/em><\/a>. 12: 70. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6107687\/\">PMC6107687<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fnana.2018.00070\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Zikopoulos B, Garc\u00eda-Cabezas M\u00c1, Barbas H. (2018). Parallel trends in cortical gray and white matter architecture and connections in primates allow fine study of pathways in humans and reveal network disruptions in autism. <a href=\"https:\/\/doi.org\/10.1371\/journal.pbio.2004559\"><em>PLoS Biology<\/em><\/a>. Feb 5;16(2):e2004559. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc5814101\/\">PMC5814101<\/a>\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/journals.plos.org\/plosbiology\/article\/file?id=10.1371\/journal.pbio.2004559&amp;type=printable\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Garc\u00eda-Cabezas MA, John YJ, Barbas H and Zikopoulos B. (2016). Distinction of neurons, glia and endothelial cells in the cerebral cortex: an algorithm based on cytological features. <a href=\"https:\/\/doi.org\/10.3389\/fnana.2016.00107\"><em>Frontiers in Neuroanatomy<\/em><\/a><em>.<\/em> Nov 1;10:107. eCollection 2016. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc5088408\/\">PMC5088408<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fnana.2016.00107\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>Zikopoulos B, Barbas H. (2013). Altered neural connectivity in excitatory and inhibitory cortical circuits in autism. <a href=\"https:\/\/doi.org\/10.3389\/fnhum.2013.00609\"><em>Frontiers in Human Neuroscience<\/em><\/a>. 7:609. eCollection 2013. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc3784686\/\">PMC3784686<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fnhum.2013.00609\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Zikopoulos B and Barbas H. (2010). Changes in prefrontal axons may disrupt the network in autism. <\/span><a href=\"https:\/\/doi.org\/10.1523\/jneurosci.2257-10.2010\"><em>Journal of Neuroscience<\/em><\/a><span>. 30(44): 14595-609. <\/span>PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc3073590\/\">PMC3073590<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.jneurosci.org\/content\/jneuro\/30\/44\/14595.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul><\/ul>\n<h4><\/h4>\n<p>&nbsp;<\/p>\n<h4>4. Mechanisms of disruption and biomarkers of schizophrenia<\/h4>\n<hr \/>\n<ul>\n<li><span>Zikopoulos B, Matuk N, Romanova I, Yazdanbakhsh A. Biophysical Modeling of Thalamocortical Circuit Dynamics: Species-Specific Insights into Neural Synchrony, Sleep Spindles, and Mechanisms of Neuropsychiatric Disorders. <a href=\"https:\/\/doi.org\/10.64898\/2026.02.01.703170\"><em>bioRxiv<\/em> <\/a>[Preprint]. 2026 Feb 3:2026.02.01.703170. doi: <a href=\"https:\/\/doi.org\/10.64898\/2026.02.01.703170\">10.64898\/2026.02.01.703170<\/a>. PMID: 41676473; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12889456\/\">PMC12889456<\/a>.<\/span> \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.64898\/2026.02.01.703170v1.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Dugan C, Zikopoulos B, Yazdanbakhsh A. A neural modeling approach to study mechanisms underlying the heterogeneity of visual spatial frequency sensitivity in schizophrenia. <a href=\"https:\/\/www.nature.com\/articles\/s41537-024-00480-2\"><em>Schizophrenia<\/em> <\/a>(Heidelb). 2024 Jul 16;10(1):63. doi: <a href=\"https:\/\/doi.org\/10.1038\/s41537-024-00480-2\">10.1038\/s41537-024-00480-2<\/a>. PMID: 39013944; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC11252134\/\">PMC11252134<\/a>.\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.nature.com\/articles\/s41537-024-00480-2.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Zhu J, Zikopoulos B, Yazdanbakhsh A. A neural model of modified excitation\/inhibition and feedback levels in schizophrenia. <a href=\"https:\/\/www.frontiersin.org\/journals\/psychiatry\/articles\/10.3389\/fpsyt.2023.1199690\/full\"><em>Front Psychiatry<\/em><\/a>. 2023 Aug 15;14:1199690. doi: <a href=\"https:\/\/doi.org\/10.3389\/fpsyt.2023.1199690\">10.3389\/fpsyt.2023.1199690<\/a>. PMID: 37900297; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC10600455\/\">PMC10600455<\/a>.\u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.frontiersin.org\/journals\/psychiatry\/articles\/10.3389\/fpsyt.2023.1199690\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Medalla M, Zikopoulos B. Laminar Excitatory Inputs to the Dorsolateral Prefrontal Cortex: Implications for Periadolescent Synaptic Plasticity and Circuit Pathology. <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0006322323013598?via%3Dihub\"><em>Biol Psychiatry<\/em><\/a>. 2023 Aug 15;94(4):280-282. doi: <a href=\"https:\/\/doi.org\/10.1016\/j.biopsych.2023.06.005\">10.1016\/j.biopsych.2023.06.005<\/a>. PMID: 37495330.\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0006322323013598\/pdfft?md5=1130086a6ffd47276f2503af14ecf410&amp;pid=1-s2.0-S0006322323013598-main.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Yazdanbakhsh A, Barbas H, Zikopoulos B. Sleep spindles in primates: Modeling the effects of distinct laminar thalamocortical connectivity in core, matrix, and reticular thalamic circuits. <a href=\"https:\/\/direct.mit.edu\/netn\/article\/7\/2\/743\/115199\/Sleep-spindles-in-primates-Modeling-the-effects-of\"><em>Netw Neurosci.<\/em><\/a> 2023 Jun 30;7(2):743-768. doi: <a href=\"https:\/\/doi.org\/10.1162\/netn_a_00311\">10.1162\/netn_a_00311<\/a>. PMID: 37397882; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC10312265\/\">PMC10312265<\/a>.\u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/direct.mit.edu\/netn\/article-pdf\/7\/2\/743\/2118366\/netn_a_00311.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Pantazopoulos H, Hossain NM, Chelini G, Durning P, Barbas H, Zikopoulos B, and Berretta S. (2022). Chondroitin Sulphate Proteoglycan Axonal Coats in the Human Mediodorsal Thalamic Nucleus. <a href=\"https:\/\/www.frontiersin.org\/journals\/integrative-neuroscience\/articles\/10.3389\/fnint.2022.934764\/full\"><em>Frontiers in Integrative Neuroscience<\/em><\/a>, 06 July 2022. d<span class=\"identifier doi\"><span class=\"id-label\">oi:<span>\u00a0<\/span><\/span><a class=\"id-link\" target=\"_blank\" rel=\"noopener noreferrer\" ref=\"linksrc=article_id_link&amp;article_id=10.3389\/fnint.2022.934764&amp;id_type=DOI\" href=\"https:\/\/doi.org\/10.3389\/fnint.2022.934764\" data-ga-category=\"full_text\" data-ga-action=\"DOI\">10.3389\/fnint.2022.934764<\/a><\/span>\u00a0\u00a0<span class=\"identifier pmc\"><span class=\"id-label\">PMCID:<span>\u00a0<\/span><\/span><a class=\"id-link\" target=\"_blank\" rel=\"noopener noreferrer\" ref=\"linksrc=article_id_link&amp;article_id=PMC9298528&amp;id_type=PMC\" href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC9298528\/\" data-ga-category=\"full_text\" data-ga-action=\"PMCID\">PMC9298528<\/a><\/span>\u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.frontiersin.org\/journals\/integrative-neuroscience\/articles\/10.3389\/fnint.2022.934764\/pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span> <\/span>John YJ, Zikopoulos B, Bullock D and Barbas H. (2018). Visual attention deficits in schizophrenia can arise from inhibitory dysfunction in thalamus or cortex. <a href=\"https:\/\/doi.org\/10.1162\/cpsy_a_00023\"><em>Computational Psychiatry<\/em><\/a>. 2, 223\u2013257. PMCID:\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/pmc6317791\/\">PMC6317791<\/a>\u00a0 \u00a0 \u00a0 \u00a0 \u00a0<a href=\"http:\/\/www.mitpressjournals.org\/doi\/pdf\/10.1162\/cpsy_a_00023\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<h4><\/h4>\n<p>&nbsp;<\/p>\n<h4>5. Mechanisms of disruption and biomarkers of neurodegenerative disorders<\/h4>\n<hr \/>\n<ul>\n<li>Bao CW, Martin E, Zikopoulos B, Yazdanbakhsh A. <span>The rotating tilted lines illusion for the evaluation of cognitive abnormalities<\/span>. <a href=\"https:\/\/www.biorxiv.org\/content\/10.64898\/2026.03.05.709956v1\"><em>bioRxiv<\/em> <\/a>[Preprint]. <span class=\"highwire-cite-metadata-pages highwire-cite-metadata\">2026.03.05.709956;<span>\u00a0<\/span><\/span><span class=\"highwire-cite-metadata-doi highwire-cite-metadata\"><span class=\"doi_label\">doi:<\/span><span>\u00a0<\/span><a href=\"https:\/\/doi.org\/10.64898\/2026.03.05.709956\">https:\/\/doi.org\/10.64898\/2026.03.05.709956<\/a><\/span>\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.64898\/2026.03.05.709956v1.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span>Barbas H, Garcia-Cabezas M\u00c1, John Y, Bautista J, McKee A, Zikopoulos B. Cortical circuit principles predict patterns of trauma induced tauopathy in humans. <a href=\"https:\/\/academic.oup.com\/cercor\/article-lookup\/doi\/10.1093\/cercor\/bhaf209\"><em>Cerebral Cortex<\/em><\/a>. 2025 Aug 1;35(8):bhaf209. doi: <a href=\"https:\/\/doi.org\/10.1093\/cercor\/bhaf209\">10.1093\/cercor\/bhaf209<\/a>. PMID: 40817910; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12357493\/\">PMC12357493<\/a>.<\/span> \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.05.02.592271v1.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Bautista J, Garc\u00eda-Cabezas M\u00c1, Medalla M, Rosene DL, Zikopoulos B, Barbas H. Pattern of ventral temporal lobe interconnections in rhesus macaques. <a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/cne.25550\"><em>J Comp Neurol.<\/em><\/a> 2023 Dec;531(18):1963-1986. doi: <a href=\"https:\/\/doi.org\/10.1002\/cne.25550\">10.1002\/cne.25550<\/a>. Epub 2023 Nov 2. PMID: 37919833.\u00a0<span class=\"identifier pmc\"><span class=\"id-label\">PMCID:<span>\u00a0<\/span><\/span><a class=\"id-link\" target=\"_blank\" rel=\"noopener noreferrer\" ref=\"linksrc=article_id_link&amp;article_id=PMC11142421&amp;id_type=PMC\" href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC11142421\/\" data-ga-category=\"full_text\" data-ga-action=\"PMCID\">PMC11142421<\/a><\/span>\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/epdf\/10.1002\/cne.25550\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Wang, Y., Taylor, E., Zikopoulos, B., Seta, F., Huang, N., Hamilton, J.A., Kantak, K.M., Morgan, K.G. (2020). Aging-induced Microbleeds of the Mouse Thalamus Compared to Sensorimotor and Memory Defects. <em><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0197458020304073?via%3Dihub\">Neurobiol Aging<\/a><\/em>. 2020 Dec 9;100:39-47. doi: 10.1016\/j.neurobiolaging.2020.11.017. [Epub ahead of print] PubMed PMID: 33477010. \u00a0 \u00a0 \u00a0 <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0197458020304073\/pdfft?md5=b9ebb4cd2b1415c201c14f0a06698561&amp;pid=1-s2.0-S0197458020304073-main.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<h4>6. Artificial intelligence and machine learning for the study of mental and neurological disorders<\/h4>\n<hr \/>\n<ul>\n<li><span>Yazdanbakhsh A, Dang KTM, Kuang K, Lian T, Liu X, Xie S, Zikopoulos B. Artificial Intelligence Networks Combining Histopathology and Machine Learning Can Extract Axon Pathology in Autism Spectrum Disorder. <em><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/aur.70135\">Autism Research<\/a><\/em>. 2025 Nov;18(11):2210-2230. doi: <a href=\"https:\/\/doi.org\/10.1002\/aur.70135\">10.1002\/aur.70135<\/a>. Epub 2025 Nov 3. PMID: 41178535; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12661275\/\">PMC12661275<\/a>. <\/span><span class=\"identifier pmc\"><\/span>\u00a0 \u00a0 \u00a0 \u00a0<a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/epdf\/10.1002\/aur.70135\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span>Lokray S, Zikopoulos B, Yazdanbakhsh A. Structural changes in autism reflect atypical brain network organization and phenotypical heterogeneity: a hybrid deep network approach. <em><a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2025.11.02.686152v2\">bioRxiv<\/a> <\/em>[Preprint]. 2025 Dec 3:2025.11.02.686152. doi: <a href=\"https:\/\/doi.org\/10.1101\/2025.11.02.686152\">10.1101\/2025.11.02.686152<\/a>. PMID: 41377502; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12687778\/\">PMC12687778<\/a>.<\/span> \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2025.11.02.686152v2.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li><span>Moroze E, Zikopoulos B, Yazdanbakhsh A. Explainable 3D CNNs link regional and network level disruption in early Parkinson&#8217;s MRIs to symptom progression. <a href=\"https:\/\/doi.org\/10.1101\/2025.11.17.688918\"><em>bioRxiv<\/em> <\/a>[Preprint]. 2025 Dec 3:2025.11.17.688918. doi: <a href=\"https:\/\/doi.org\/10.1101\/2025.11.17.688918\">10.1101\/2025.11.17.688918<\/a>. PMID: 41383753; PMCID: <a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC12694578\/\">PMC12694578<\/a>.<\/span> \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2025.11.17.688918v2.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<ul>\n<li>Yazdanbakhsh A, Dang K, Kuang K, Lian T, Liu X, Xie S, Zikopoulos B. Artificial intelligence networks combining histopathology and machine learning can extract axon pathology in autism spectrum disorder. <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.10.25.620308v1\"><em>bioRxiv<\/em><\/a> [Preprint]. 2024 October; :2024.10.25.620308. doi: <a href=\"https:\/\/doi.org\/10.1101\/2024.10.25.620308\">10.1101\/2024.10.25.620308<\/a>. \u00a0 \u00a0 \u00a0<a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.10.25.620308v1.full.pdf\">Download PDF<\/a><\/li>\n<\/ul>\n<hr \/>\n<h4><\/h4>\n<p>&nbsp;<\/p>\n<h4><strong>Book Chapters (peer-reviewed)<\/strong><strong><\/strong><\/h4>\n<hr \/>\n<ul>\n<li><span> <\/span><span>Barbas H and Zikopoulos B<\/span><span> (2007). Sequential and parallel circuits for emotional processing in primate orbitofrontal cortex<\/span>. <em>In: <span>The Orbitofrontal Cortex<\/span><\/em><span> <em>(edited by David Zald and Scott Rauch)<\/em>, <\/span>pp57-92. New York: Oxford UP.\u00a0 \u00a0 \u00a0 \u00a0\u00a0<a href=\"\/brainlab\/files\/2020\/07\/2007-OFC-book-Chap04.pdf\"><span>Download PDF<\/span><\/a><\/li>\n<\/ul>\n<hr \/>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>&nbsp; Complete List of Published Work in:\u00a0 \u00a0My Bibliography\u00a0 or\u00a0\u00a0Pubmed Bibliography Page\u00a0\u00a0 or \u00a0\u00a0Google Scholar Page &nbsp; 1. Networks for flexible behavior and attention in the thalamus, amygdala, and cortex Barbas H, Zikopoulos B, John YJ. The inevitable inequality of cortical columns. Front Syst Neurosci. 2022 Sep 20;16:921468. doi: 10.3389\/fnsys.2022.921468. PMID: 36203745; PMCID: PMC9532056.\u00a0 \u00a0 [&hellip;]<\/p>\n","protected":false},"author":12250,"featured_media":0,"parent":0,"menu_order":4,"comment_status":"closed","ping_status":"closed","template":"page-templates\/no-sidebars.php","meta":[],"_links":{"self":[{"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/pages\/16"}],"collection":[{"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/users\/12250"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/comments?post=16"}],"version-history":[{"count":31,"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/pages\/16\/revisions"}],"predecessor-version":[{"id":526,"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/pages\/16\/revisions\/526"}],"wp:attachment":[{"href":"https:\/\/sites.bu.edu\/brainlab\/wp-json\/wp\/v2\/media?parent=16"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}