{"id":14,"date":"2017-11-26T15:09:29","date_gmt":"2017-11-26T20:09:29","guid":{"rendered":"https:\/\/sites.bu.edu\/boas\/?page_id=14"},"modified":"2025-04-24T10:35:36","modified_gmt":"2025-04-24T14:35:36","slug":"research","status":"publish","type":"page","link":"https:\/\/sites.bu.edu\/boas\/research\/","title":{"rendered":"Research"},"content":{"rendered":"<p>You can read about our research interests on the <a href=\"http:\/\/www.bu.edu\/neurophotonics\/\" target=\"_blank\" rel=\"noopener noreferrer\">Neurophotonics Center<\/a> website:<\/p>\n<ul>\n<li><a href=\"http:\/\/www.bu.edu\/neurophotonics\/research\/fnirs\/\" target=\"_blank\" rel=\"noopener noreferrer\">Functional Near-Infrared Spectroscopy (fNIRS)<\/a><\/li>\n<li><a href=\"http:\/\/www.bu.edu\/neurophotonics\/research\/oct\/\" target=\"_blank\" rel=\"noopener noreferrer\">Optical Coherence Tomography (OCT)<\/a><\/li>\n<li><a href=\"http:\/\/www.bu.edu\/neurophotonics\/research\/lsci\/\" target=\"_blank\" rel=\"noopener noreferrer\">Laser Speckle Contrast Imaging (LSCI)<\/a><\/li>\n<li><a href=\"http:\/\/www.bu.edu\/neurophotonics\/research\/fus\/\" target=\"_blank\" rel=\"noopener noreferrer\">Functional Ultrasound Imaging (fUS)<\/a><\/li>\n<\/ul>\n<h2>Past Theses<\/h2>\n<ul>\n<li>Antonio Ortega, PhD, Nov 30, 2022, <a href=\"https:\/\/open.bu.edu\/items\/e6b33e61-71e7-41c0-a91d-36dc7533ed7f\">Thesis PDF<\/a><\/li>\n<li>Jairui Yang, PhD, Nov 30, 2022, Thesis PDF<\/li>\n<li>Smrithi Sunil, PhD, July 20, 2021,Thesis PDF<\/li>\n<\/ul>\n<h2>Published Data Archive and Open Resources<\/h2>\n<p>Starting in 2019, we are making the effort to publicly archive the data and processing code related to our published papers.<\/p>\n<p><span style=\"text-decoration: underline;\"><strong>2020<\/strong><\/span><\/p>\n<p><span>Von L\u00fchmann A, Ortega-Martinez A, Boas DA, Y\u00fccel MA. Using the General Linear Model to Improve Performance in fNIRS Single Trial Analysis and Classification: A Perspective. Frontiers in Human Neuroscience. 2020 Feb 18;14:30.<\/span><\/p>\n<ul>\n<li><a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fnhum.2020.00030\/full?report=reader\">Journal Link<\/a><\/li>\n<li>Associated <a href=\"https:\/\/github.com\/BUNPC\/GLM-BCI\">code<\/a> for the model and <a href=\"https:\/\/g-adf574.63b05.8540.data.globus.org\/Shared%20Drives\/BOAS%20Group%20Share\/Publications%20Data\/2020_VonLuhmann_frontiers.rar\">data<\/a> on Globus.<\/li>\n<\/ul>\n<p><span style=\"text-decoration: underline;\"><strong>2019<\/strong><\/span><\/p>\n<p><span>Cheng X, Li Y, Mertz J, Sakad\u017ei\u0107 S, Devor A, Boas DA, Tian L. Development of a beam propagation method to simulate the point spread function degradation in scattering media. Optics Letters. 2019 Oct 15;44(20):4989-92.<\/span><\/p>\n<ul>\n<li><a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-44-20-4989\">Journal Link<\/a><\/li>\n<li>Associated <a href=\"https:\/\/github.com\/BUNPC\/Beam-Propagation-Method\">code<\/a> for the model and <a href=\"https:\/\/github.com\/BUNPC\/BPMResults\">data<\/a> on GitHub.<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><span>Jianbo Tang, Sefik Evren Erdener, Smrithi Sunil, and David A. Boas &#8220;Normalized field autocorrelation function-based optical coherence tomography three-dimensional angiography,&#8221; Journal of Biomedical Optics 24(3), 036005 (13 March 2019).<\/span><\/p>\n<ul>\n<li><a href=\"https:\/\/doi.org\/10.1117\/1.JBO.24.3.036005\">Journal Link<\/a><\/li>\n<li>MATLAB code and data processing guide for Optical Coherence Tomography Angiography(<a href=\"https:\/\/hdl.handle.net\/2144\/37075\">Link<\/a>)<\/li>\n<li>MATLAB code and data processing guide for g1OCTA(<a href=\"https:\/\/hdl.handle.net\/2144\/37074\">Link<\/a>)<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<div><span>Cheng\u00a0<\/span><text><\/text><span>X, Berman\u00a0<\/span><text><\/text><span>AJL, Polimeni\u00a0<\/span><text><\/text><span>JR,<\/span><span>\u00a0<\/span>Richard B. Buxton RB, Louis Gagnon L, Devor A, Sakad\u017ei\u0107 S, Boas DA.\u00a0<span class=\"articleTitle\">Dependence of the MR signal on the magnetic susceptibility of blood studied with models based on real microvascular networks<\/span><span>.\u00a0<\/span><i>Magn Reson Med.<\/i><span>.\u00a0<\/span><span class=\"pubYear\">2019<\/span><span>;1\u201310.\u00a0<\/span><\/div>\n<div><\/div>\n<ul>\n<li><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/full\/10.1002\/mrm.27660\">Journal link<\/a><\/li>\n<li>Associated <a href=\"https:\/\/github.com\/BUNPC\/VAN_modeling\">code<\/a> for the model and <a href=\"https:\/\/github.com\/cxjphy\/VANModeling_Beta\">data<\/a> on Github<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><span style=\"text-decoration: underline;\"><strong>2018<\/strong><\/span><\/p>\n<div>Postnov DD, Erdener SE, Kilic K, Boas DA. Cardiac pulsatility mapping and vessel type identification using laser speckle contrast imaging. Biomedical Optics Express. 2018 Dec 1;9(12):6388-97.<\/div>\n<ul>\n<li><a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-9-12-6388\">Journal link<\/a><\/li>\n<li>Associated algorithms and analysis code (<a href=\"https:\/\/github.com\/BUNPC\/laserSpeckleImaging\/blob\/master\/runPulsatilityBasedIdentification.m\">GitHub<\/a>):<\/li>\n<li>Associated data and figures generation code (<a href=\"https:\/\/codeocean.com\/capsule\/7895404\/tree\/v2\">Code Ocean<\/a>):<a target=\"_blank\" rel=\"noopener noreferrer\" class=\"autolinked\" data-behavior=\"truncate\" href=\"https:\/\/codeocean.com\/capsule\/7895404\/tree\/v1\"><\/a><\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><span class=\"Apple-style-span\">Perkins, L.N., Devor, A., Gardner, T.J., and Boas, D.A., \u201cExtracting individual neural activity recorded through splayed optical microfibers.,\u201d Neurophotonics 5(4), 045009 (2018).<\/span><\/p>\n<ul>\n<li><a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/Neurophotonics\/volume-5\/issue-04\/045009\/Extracting-individual-neural-activity-recorded-through-splayed-optical-microfibers\/10.1117\/1.NPh.5.4.045009.full\">Journal link<\/a><\/li>\n<li>Associated data and code on <a href=\"https:\/\/codeocean.com\/2018\/11\/12\/fiber-source-separation\/code\">Code Ocean<\/a>\u00a0(more portable code on\u00a0<a href=\"https:\/\/github.com\/nathanntg\/fiber-source-separation\">GitHub<\/a>)<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><span>Tang, J, Erdener, S E, Li, B, et al. Shear\u2010induced diffusion of red blood cells measured with dynamic light scattering\u2010optical coherence tomography. J. Biophotonics. 2018;11:e201700070.<\/span><\/p>\n<ul>\n<li><a href=\"https:\/\/doi.org\/10.1002\/jbio.201700070\">Journal Link<\/a><\/li>\n<li>MATLAB code and data processing guide for Dynamic Light Scattering-Optical Coherence Tomography(<a href=\"https:\/\/hdl.handle.net\/2144\/37072\">Link<\/a>)<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n<p><span style=\"text-decoration: underline;\"><strong>2017<\/strong><\/span><\/p>\n<p><span>Tang, J., Erdener, S. E., Fu, B. &amp; Boas, D. A. Capillary red blood cell velocimetry by phase-resolved optical coherence tomography. Opt. Lett. 42, 3976\u20133979 (2017).<\/span><\/p>\n<ul>\n<li><a href=\"https:\/\/doi.org\/10.1364\/OL.42.003976\">Journal Link<\/a><\/li>\n<li>MATLAB code and data processing guide for phase resolved Doppler Optical Coherence Tomography(<a href=\"https:\/\/hdl.handle.net\/2144\/37076\">Link<\/a>)<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>You can read about our research interests on the Neurophotonics Center website: Functional Near-Infrared Spectroscopy (fNIRS) Optical Coherence Tomography (OCT) Laser Speckle Contrast Imaging (LSCI) Functional Ultrasound Imaging (fUS) Past Theses Antonio Ortega, PhD, Nov 30, 2022, Thesis PDF Jairui Yang, PhD, Nov 30, 2022, Thesis PDF Smrithi Sunil, PhD, July 20, 2021,Thesis PDF Published [&hellip;]<\/p>\n","protected":false},"author":13261,"featured_media":0,"parent":0,"menu_order":4,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/pages\/14"}],"collection":[{"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/users\/13261"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/comments?post=14"}],"version-history":[{"count":42,"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/pages\/14\/revisions"}],"predecessor-version":[{"id":1060,"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/pages\/14\/revisions\/1060"}],"wp:attachment":[{"href":"https:\/\/sites.bu.edu\/boas\/wp-json\/wp\/v2\/media?parent=14"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}