{"id":10,"date":"2013-07-17T14:10:16","date_gmt":"2013-07-17T18:10:16","guid":{"rendered":"https:\/\/sites.bu.edu\/biomol\/?page_id=10"},"modified":"2015-03-05T11:22:34","modified_gmt":"2015-03-05T16:22:34","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.bu.edu\/biomol\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p>Gomez A, Miller NS and Smolina. &#8220;Visual detection of bacterial pathogens via PNA-based padlock probe assembly and isothermal amplification of DNAzymes&#8221; Anal Chem.\u00a086(24):11992-8. (2014). <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/25415469\">PMID:\u00a025415469<\/a><\/p>\n<p>Yaroslavsky AI and Smolina I. &#8220;Fluorescence imaging of single-copy DNA sequences within the human genome using PNA-directed padlock probe assembly&#8221; Chem Biol.\u00a020(3):445-53. (2013).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23521801\">PMID23521801<\/a><\/p>\n<p>Konry T,\u00a0Smolina I, Yarmush JM, Irimia D and Yarmush ML. \u201cUltrasensitive detection of low-abundance surface-marker protein using isothermal Rolling Circle Amplification in a microfluidic nanoliter platform\u201d<i> Small<\/i>.\u00a07(3):395-400.\u00a0(2011).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21294269\">PMID21294269<\/a><\/p>\n<p>Smolina IV, Miller NS and\u00a0Frank-Kamenetskii MD. \u201cPNA-based microbial pathogen identification and resistance marker detection: an accurate, isothermal rapid assay based on genome-specific features\u201d\u00a0<i>Artif DNA PNA XNA<\/i>. 1(2), 1-7. (2010).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21686242\">PMID21686242<\/a><\/p>\n<p>Smolina IV, Kuhn H, Lee C and\u00a0Frank-Kamenetskii MD. \u201cFluorescence-based detection of short DNA sequences under non-denaturing conditions\u201d<i> Bioorg. Med. Chem.<\/i> 16(1), 84-93. (2008).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/17512202\">PMID17512202<\/a><\/p>\n<p>Smolina IV, Lee C and\u00a0Frank-Kamenetskii MD. \u201cDetection of low copy genomic DNA sequences in individual bacterial cells using PNA-assisted rolling circle amplification and fluorescence in situ hybridization\u201d\u00a0<i>Appl. Environ. Microbiol.<\/i> 73(7), 2324-2328. (2007).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/17293504\">PMID17293504<\/a><\/p>\n<p>Smolina IV, Demidov VV, Soldatenkov VA, Chasovskikh SG and\u00a0Frank-Kamenetskii MD. \u201cEnd invasion of peptide nucleic acids (PNAs) with mixed-base composition into linear DNA duplexes\u201d<i>Nucleic Acids Res.<\/i> 33, e146. (2005).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/16204449\">PMID16204449<\/a><\/p>\n<p>Smolina IV, Cherny DI, Nietupski RM, Beals T, Smith JH, Lane DJ, Broude NE\u00a0and Demidov VV. \u201cHigh-density labeled fluorescent RCA amplicons for fast and sensitive DNA diagnostics\u201d<i> Anal. Biochem<\/i>. 347, 152-155. (2005).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/16243289\">PMID16243289<\/a><\/p>\n<p>Smolina IV, Demidov VV, Cantor CR\u00a0and Broude NE. \u201cReal-time monitoring of branched rolling-circle DNA amplification (RCA) with peptide nucleic acid (PNA) beacon\u201d\u00a0<i>Anal. Biochem<\/i>. 335(2), 326-329. (2004).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/15556572\">PMID15556572<\/a><\/p>\n<p>Smolina IV and Demidov VV. \u201cSequence-universal recognition of duplex DNA by oligonucleotides via pseudocomplementarity and helix invasion\u201d\u00a0<i>Chem. Biol.<\/i> 10, 591-595. (2003).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/12890532\">PMID12890532<\/a><\/p>\n<p>Smolina IV, Demidov VV and\u00a0Frank-Kamenetskii MD. \u201cPausing of DNA polymerase on duplex DNA template due to ligand binding\u201d<i> J. Mol. Biol.<\/i> 326(4), 1113-1125.(2003).\u00a0<a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/12589757\">PMID12589757<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Gomez A, Miller NS and Smolina. &#8220;Visual detection of bacterial pathogens via PNA-based padlock probe assembly and isothermal amplification of DNAzymes&#8221; Anal Chem.\u00a086(24):11992-8. (2014). PMID:\u00a025415469 Yaroslavsky AI and Smolina I. &#8220;Fluorescence imaging of single-copy DNA sequences within the human genome using PNA-directed padlock probe assembly&#8221; Chem Biol.\u00a020(3):445-53. (2013).\u00a0PMID23521801 Konry T,\u00a0Smolina I, Yarmush JM, Irimia D [&hellip;]<\/p>\n","protected":false},"author":7350,"featured_media":0,"parent":0,"menu_order":5,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/pages\/10"}],"collection":[{"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/users\/7350"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/comments?post=10"}],"version-history":[{"count":16,"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/pages\/10\/revisions"}],"predecessor-version":[{"id":69,"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/pages\/10\/revisions\/69"}],"wp:attachment":[{"href":"https:\/\/sites.bu.edu\/biomol\/wp-json\/wp\/v2\/media?parent=10"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}