{"id":100,"date":"2019-06-30T09:36:31","date_gmt":"2019-06-30T13:36:31","guid":{"rendered":"https:\/\/sites.bu.edu\/biomicroscopy\/?page_id=100"},"modified":"2026-03-25T10:47:30","modified_gmt":"2026-03-25T14:47:30","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.bu.edu\/biomicroscopy\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<h5><a href=\"https:\/\/scholar.google.com\/citations?hl=en&amp;user=PofiV8kAAAAJ&amp;view_op=list_works&amp;sortby=pubdate\">Complete list of publications<\/a><\/h5>\n<h5><a href=\"https:\/\/patents.google.com\/?inventor=jerome+mertz&amp;oq=jerome+mertz\">Biomicroscopy lab patents<\/a><\/h5>\n<h5>Biomicroscopy lab publications:<\/h5>\n<ul>\n<li>N. Khetan and J. Mertz, &#8220;Far-field compressive ultrasound beamforming&#8221;, arXiv 2603.22496 (2026). <a href=\"https:\/\/arxiv.org\/abs\/2603.22496\">link<\/a>.<\/li>\n<li>M. Sheinman, M. Polkovnikov, L. Saunders, P. Vujkovic-Cvijin, S. Erramilli, L. D. Ziegler, K. Kundu, R. Rajagopal, B. Zhao, C. McMahon, M. K. Hong, and J. Mertz, &#8220;Widefield pump-probe microscopy with coherent background subtraction by angle-compensated temporal shearing&#8221;, Opt. Express 34, 9871 (2026). <a href=\"https:\/\/opg.optica.org\/oe\/fulltext.cfm?uri=oe-34-6-9871\">link<\/a>.<\/li>\n<li>J. Czuchnowski, C. Li, H. Ni, B. Weissbourd, and J. Mertz, &#8220;3D space-variant modal deconvolution with computed point spread functions&#8221;, arXiv 2512.00225 (2025). <a href=\"https:\/\/arxiv.org\/abs\/2512.00225\">link<\/a>.<\/li>\n<li>N. Khetan, J. Mertz, &#8220;Plane-wave compounding with adaptive joint coherence factor weighting&#8221;, Ultrasonics 149, 107573 (2025). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S0041624X25000101\">link<\/a><\/li>\n<li>S. Zheng, I. Davison, A. Garrett, X. Lin, N. Chitkushev, D. Roblyer, J. Mertz, &#8220;Robust speckle contrast imaging based on spatial covariance&#8221;, Optica 11,\u00a01733-1741 (2024) <span class=\"highwire-cite-metadata-doi\">. <a href=\"https:\/\/opg.optica.org\/optica\/fulltext.cfm?uri=optica-11-12-1733&amp;id=565377\">link<\/a><\/span><\/li>\n<li>S. Xiao, W. Cunningham, K. Kondabolu, E. Lowet, M. Moya, R. Mount, C. Ravasio, M. Economo, X. Han, J. Mertz, &#8220;Large-scale deep tissue voltage imaging with targeted illumination confocal microscopy&#8221;, Nat. Meth. 21, 1094-1102<span class=\"highwire-cite-metadata-doi\"> (2024). <a href=\"https:\/\/www.nature.com\/articles\/s41592-024-02275-w\">link<\/a><\/span><\/li>\n<li>G. Hu, J. Greene, J. Zhu, Q. Yang, S. Zheng, Y. Li, J. Alido, R. Guo, J. Mertz, L. Tian, &#8220;HiLo microscopy with caustic illumination&#8221;, Biomed. Opt. Exp. 15, 4101-4110 (2024). <span class=\"highwire-cite-metadata-doi\"><a href=\"https:\/\/opg.optica.org\/boe\/fulltext.cfm?uri=boe-15-7-4101&amp;id=551448\">link<\/a><\/span><\/li>\n<li>N. Khetan, J. Mertz, &#8220;Plane-wave compounding with adaptive joint coherence factor weighting&#8221;, arXiv, <span class=\"label\">doi:<\/span><span class=\"highwire-cite-metadata-doi\"> https:\/\/doi.org\/10.48550\/arXiv.2404.12533 (2024). <a href=\"https:\/\/arxiv.org\/abs\/2404.12533\">link<\/a><\/span><\/li>\n<li>S. Zheng, M. Koyama, J. Mertz, &#8220;Multiplane HiLo microscopy with speckle illumination and non-local means denoising&#8221;, J. Biomed. Opt. 28, 116502 (2023). <span class=\"highwire-cite-metadata-doi\"><a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/journal-of-biomedical-optics\/volume-28\/issue-11\/116502\/Multiplane-HiLo-microscopy-with-speckle-illumination-and-non-local-means\/10.1117\/1.JBO.28.11.116502.full?SSO=1\">link<\/a><\/span><\/li>\n<li>B. Zhao, J. Mertz, &#8220;Resolution enhancement with deblurring by pixel reassignment&#8221;, Adv. Photon. 5, 066004 (2023). <span class=\"highwire-cite-metadata-doi\"><a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/advanced-photonics\/volume-5\/issue-06\/066004\/Resolution-enhancement-with-deblurring-by-pixel-reassignment\/10.1117\/1.AP.5.6.066004.full?SSO=1\">link<\/a><\/span><\/li>\n<li>Y. X. Huang, S. Mahler, J. Mertz, C. Yang, &#8220;Interferometric speckle visibility spectroscopy (iSVS) for measuring decorrelation time and dynamics of moving samples with enhanced signal-to-noise ratio and relaxed reference requirements&#8221;, Opt. Exp. 31, 31253-31266 (2023). <span class=\"highwire-cite-metadata-doi\"> <a href=\"https:\/\/opg.optica.org\/oe\/fulltext.cfm?uri=oe-31-19-31253&amp;id=537206\">link<\/a><\/span><\/li>\n<li>S. Mahler, Y. X. Huang, M. Liang, A. Avalos, J. M. Tyszka, J. Mertz, C. Yang, &#8220;Assessing depth sensitivity in laser interferometry speckle visibility spectroscopy (iSVS) through source-to-detector distance variation and cerebral blood flow monitoring in humans and rabbits&#8221;, Biomed. Opt. Exp. 14, 4964-4978 (2023). <span class=\"highwire-cite-metadata-doi\"> <a href=\"https:\/\/opg.optica.org\/boe\/fulltext.cfm?uri=boe-14-9-4964&amp;id=536978\">link<\/a><\/span><\/li>\n<li>T. D. Weber, M. V. Moya, K. Kilic, J. Mertz, M. N. Economo, \u201cHigh-speed multiplane confocal microscopy for voltage imaging in densely labeled neuronal populations\u201d, Nat. Neurosci. https:\/\/doi.org\/10.1038\/s41593-023-01408-2 (2023)<span class=\"highwire-cite-metadata-doi\">. <a href=\"https:\/\/www.nature.com\/articles\/s41593-023-01408-2#article-info\">link<\/a><\/span><o:p><\/o:p><\/li>\n<li>S. Xiao, W. Cunningham, K. Kondabolu, E. Lowet, M. Moya, R. Mount, C. Ravasio, M. Economo, X. Han, J. Mertz, &#8220;Large-scale deep tissue voltage imaging with targeted illumination confocal microscopy&#8221;, bioRxiv, <span class=\"highwire-cite-metadata-doi\">https:\/\/doi.org\/10.1101\/2023.07.21.548930 (2023). <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2023.07.21.548930v1\">link<\/a><\/span><\/li>\n<li>B. Zhao, J. Mertz, &#8220;Resolution enhancement with deblurring by pixel reassignment (DPR)&#8221;, bioRxiv, <span class=\"highwire-cite-metadata-doi\">https:\/\/doi.org\/10.1101\/2023.07.24.550382 (2023). <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2023.07.24.550382v1\">link<\/a><\/span><\/li>\n<li>B. Zhao, M. Koyama, J. Mertz, &#8220;High resolution multi-z confocal microscopy with a diffractive optical element&#8221;, Biomed. Opt. Exp. 14, 3057-3071 (2023). <a href=\"https:\/\/opg.optica.org\/boe\/fulltext.cfm?uri=boe-14-6-3057&amp;id=531113\">link<\/a><\/li>\n<li>S. Xiao, J. T. Giblin, D. A. Boas, J. Mertz, &#8220;High-throughput deep tissue two-photon microscopy at kilohertz frame rates&#8221;, Optica 10, 763-769 (2023). <a href=\"https:\/\/opg.optica.org\/optica\/fulltext.cfm?uri=optica-10-6-763&amp;id=531776\">link<\/a><\/li>\n<li>A. Abdelfattah, J. Zheng, &#8230; , &#8220;Sensitivity optimization of a rhodopsin-based fluorescent voltage indicator&#8221;, Neuron, 8;S0896-6273(23)00205-2 (2023). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0896627323002052?via%3Dihub\">link <\/a><\/li>\n<li>S. Zheng, J. Mertz, &#8220;Correcting sampling bias in speckle contrast imaging&#8221;, Opt Lett. 47, 6333-6336 (2022). <a href=\"https:\/\/opg.optica.org\/ol\/viewmedia.cfm?uri=ol-47-24-6333&amp;seq=0\">link <\/a><\/li>\n<li>S. Zheng, J. Mertz, &#8220;Direct characterization of tissue dynamics with laser speckle contrast imaging&#8221;, Biomed. Opt. Exp. 13, 4118-4133 (2022). <a href=\"https:\/\/opg.optica.org\/boe\/fulltext.cfm?uri=boe-13-8-4118&amp;id=477851\">link <\/a><\/li>\n<li>S. Gigan, O. Katz, &#8230;, \u201cRoadmap on wavefront shaping and deep imaging in compex media\u201d, J. Phys. Photonics 4, 042501\u00a0<span class=\"highwire-cite-metadata-doi\"> (2022). <a href=\"https:\/\/iopscience.iop.org\/article\/10.1088\/2515-7647\/ac76f9\/meta\">link<\/a><\/span><o:p><\/o:p><\/li>\n<li>T. D. Weber, M. V. Moya, J. Mertz, M. N. Economo, \u201cHigh-speed, multi-Z confocal microscopy for voltage imaging in densely labeled neuronal populations\u201d, bioRxiv, <span class=\"label\">doi:<\/span><span class=\"highwire-cite-metadata-doi\"> https:\/\/doi.org\/10.1101\/2021.12.10.472140 (2021). <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2021.12.10.472140v1\">link<\/a><\/span><o:p><\/o:p><\/li>\n<li>M. <span>S<\/span>heinman, S. Erramilli, L. Ziegler, M.<span> <\/span>K. Hong, <span>J<\/span>. <span>M<\/span>ertz, \u201cFlatfield ultrafast imaging with single-shot non-synchronous array photography,\u201d Opt. Lett. 47, 577-580 (2022). <a href=\"https:\/\/opg.optica.org\/ol\/abstract.cfm?uri=ol-47-3-577\">link<\/a><\/li>\n<li>S. Xiao, I. Davison, J. Mertz, \u201cScan multiplier unit for ultrafast laser scanning beyond the inertia limit\u201d, Optica 8, 1403-1404 (2021). <a href=\"https:\/\/www.osapublishing.org\/optica\/fulltext.cfm?uri=optica-8-11-1403&amp;id=462788\">link<\/a><\/li>\n<li>S. Xiao, E. Lowet, H. J. Gritton, P Fabris, Y. Wang, J. Sherman, R. A. Mount, H.-a Tseng, H.-Y Man, C. Straub, K. D. Piatkevich, E. S. Boyden, J.Mertz, X. Han, \u201cLarge-scale voltage imaging in behaving mice using targeted illumination\u201d, iScience 24, 103263 (2021). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2589004221012323\">link<\/a><\/li>\n<li>S. Zheng, S. Xiao, L. Kretsge, A. Cruz-Martin, J. Mertz, &#8220;Depth resolution in multifocus laser speckle contrast imaging&#8221;, Opt. Lett. 46, 5059-5062 (2021). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-46-19-5059\">link<\/a><\/li>\n<li>S. Xiao, S. Zheng, J. Mertz, &#8220;High-speed multifocus phase imaging in thick tissue&#8221;, Biomed. Opt. Exp. 12, 5782-5792 (2021). <a href=\"https:\/\/www.osapublishing.org\/boe\/fulltext.cfm?uri=boe-12-9-5782&amp;id=458085\">link <\/a><\/li>\n<li>T. D. Weber, N. Khetan, R. Yang, J. Mertz, &#8220;Ultrasound differential phase contrast using backscattering and the memory effect&#8221;, Appl. Phys. Lett. 118, 124103 (2021). <a href=\"https:\/\/aip.scitation.org\/doi\/10.1063\/5.0048071\">link<\/a><\/li>\n<li>J.-M. Tsang, H. J. Gritton, S. L. Das, T. D. Weber, C. S. Chen, X. Han, J. Mertz, &#8220;Fast, multiplane line-scan confocal microscopy using axially distributed slits&#8221;, Biomed. Opt. Express 12, 1339-1350 (2021). <a href=\"https:\/\/www.osapublishing.org\/boe\/fulltext.cfm?uri=boe-12-3-1339&amp;id=447591\">link <\/a><\/li>\n<li>\n<div class=\"highwire-cite-authors\"><span class=\"highwire-citation-authors\"><span class=\"highwire-citation-author first has-tooltip hasTooltip\" data-delta=\"0\" data-hasqtip=\"0\" aria-describedby=\"qtip-0\"><span class=\"nlm-given-names\">S.<\/span> <span class=\"nlm-surname\">Xiao<\/span><\/span>, <span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"1\" data-hasqtip=\"1\" aria-describedby=\"qtip-1\"><span class=\"nlm-given-names\">H.<\/span> <span class=\"nlm-surname\">Gritton<\/span><\/span>, <span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"2\" data-hasqtip=\"2\"><span class=\"nlm-given-names\">H.<\/span> <span class=\"nlm-surname\">Tseng<\/span><\/span>, <span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"3\" data-hasqtip=\"3\"><span class=\"nlm-given-names\">D.<\/span> <span class=\"nlm-surname\">Zemel<\/span><\/span>, <span class=\"highwire-citation-author\" data-delta=\"4\"><span class=\"nlm-given-names\">X.<\/span> <span class=\"nlm-surname\">Han<\/span><\/span>, <span class=\"highwire-citation-author has-tooltip hasTooltip\" data-delta=\"5\" data-hasqtip=\"4\"><span class=\"nlm-given-names\">J.<\/span> <span class=\"nlm-surname\">Mertz<\/span><\/span><\/span>, &#8220;High-contrast multifocus microscopy with a single camera and z-splitter prism&#8221;, <span class=\"highwire-cite-metadata-journal highwire-cite-metadata\">Optica 7, 1477-1486<\/span><span class=\"highwire-cite-metadata-pages highwire-cite-metadata\"><\/span> (2020). <a href=\"https:\/\/www.osapublishing.org\/optica\/fulltext.cfm?uri=optica-7-11-1477&amp;id=441827\">link<\/a><\/div>\n<\/li>\n<li>N. Khetan, T. Weber, J. Mertz, &#8220;Speed-of-sound imaging by differential phase contrast with angular compounding&#8221;, arXiv 2007.03156 (2020). <a href=\"https:\/\/arxiv.org\/abs\/2007.03156\">link<\/a><\/li>\n<li>T. D. Weber, J. Mertz, &#8220;In vivo corneal and lenticular microscopy with asymmetric fundus retroillumination&#8221;, Biomed. Opt. Express 11, 3263-3273 (2020). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-11-6-3263\">link<\/a><\/li>\n<li>D. R. Beaulieu, I. G. Davison, K. Kilic, T. G. Bifano, J. Mertz, &#8220;Simultaneous multiplane imaging with reverberation\u00a0 two-photon microscopy&#8221;, Nat. Meth. 17, 283-286 (2020).\u00a0<a href=\"https:\/\/www.nature.com\/articles\/s41592-019-0728-9\">link<\/a><\/li>\n<li>J. Mertz, &#8220;Strategies for volumetric imaging with a fluorescence microscope&#8221;, Optica 6, 1261-1268 (2019). <a href=\"https:\/\/www.osapublishing.org\/optica\/abstract.cfm?uri=optica-6-10-1261\">link<\/a><\/li>\n<li>X. Cheng, Y. Li, J. Mertz, S. Sakadzic, A. Devor, D. A. Boas, L. Tian, &#8220;Development of a beam propagation method to simulate the point spread function degradation in scattering media&#8221;, Opt. Lett. 44, 4989-4992 (2019).\u00a0<a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-44-20-4989\">link<\/a><\/li>\n<li>S. Xiao and J. Mertz, &#8220;Contrast improvement in two-photon microscopy with instantaneous differential aberration imaging&#8221;, Biomed. Opt. Express 10, 2467-2477 (2019). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-10-5-2467\">link<\/a><\/li>\n<li>A. Badon, S. Bensussen, H. J. Gritton, M. R. Awal, C. V. Gabel, X. Han, J. Mertz, &#8220;Video-rate large-scale imaging with Multi-Z confocal microscopy&#8221;, Optica 6, 389-395 (2019). <a href=\"https:\/\/www.osapublishing.org\/optica\/abstract.cfm?uri=optica-6-4-389\">link<\/a><\/li>\n<li>C. Ba, W. J. Shain, T. G. Bifano, J. Mertz, &#8220;High-throughput label-free flow cytometry based on matched-filter compressive imaging&#8221;,\u00a0Biomed. Opt. Express 9, 6145-6153 (2018). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-9-12-6145\">link<\/a><\/li>\n<li>T. D. Weber and J. Mertz, &#8220;Non-mydriatic chorioretinal imaging in a transmission geometry and application to retinal oximetry&#8221;, Biomed. Opt. Express 9, 3867-3882 (2018). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-9-8-3867\">link<\/a><\/li>\n<li>S. Xiao, H. Tseng, H. Gritton, X. Han, J. Mertz, &#8220;Video-rate volumetric neuronal imaging using 3D targeted illumination&#8221;, Sci. Reports 8, 7921 (2018). <a href=\"https:\/\/www.nature.com\/articles\/s41598-018-26240-8\">link<\/a><\/li>\n<li>C. Ba, J.-M. Tsang, J. Mertz, \u201cFast hyperspectral phase and amplitude imaging in scattering tissue\u201d, Opt. Lett. 43, 2058-2061 (2018). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-43-9-2058\">link<\/a><\/li>\n<li>A. Sentenac and J. Mertz, \u201cUnified description of three-dimensional optical diffraction microscopy: from transmission microscopy to optical coherence tomography: tutorial\u201d, J. Opt. Soc. Am. A 35, 748-754 (2018). <a href=\"https:\/\/www.osapublishing.org\/josaa\/abstract.cfm?URI=josaa-35-5-748\">link<\/a><\/li>\n<li>W. J. Shain, N. A. Vickers, J. Li, X. Han, T. Bifano, J. Mertz, \u201cAxial localization with modulated-illumination extended-depth-of-field microscopy\u201d, Biomed. Opt. Express 9, 1771-1782 (2018). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-9-4-1771\">link<\/a><\/li>\n<li>W. J. Shain, N. A. Vickers, A. Negash, T. Bifano, A. Sentenac, J. Mertz, \u201cDual fluorescence-absorption deconvolution applied to extended-depth-of-field microscopy\u201d, Opt. Lett. 42, 4183-4186 (2017). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-42-20-4183\">link<\/a><\/li>\n<li>R. Yang, T. D. Weber, E. D. Witkowski, I. G. Davison, J. Mertz, \u201cNeuronal imaging with ultrahigh dynamic range multiphoton microscope\u201d, Sci. Rep. 7:5817 (2017). <a href=\"https:\/\/www.nature.com\/articles\/s41598-017-06065-7\">link<\/a><\/li>\n<li>W. J. Shain, N. A. Vickers, B. G. Goldberg, T. Bifano, J. Mertz, \u201cExtended depth of field microscopy with a high-speed deformable mirror\u201d, Opt. Lett. 42, 995-998 (2017). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-42-5-995\">link<\/a><\/li>\n<li>C. Ba, M. Palmiere, J. Ritt, J. Mertz, \u201cDual-modality endomicroscopy with co-registered fluorescence and phase contrast\u201d, Biomed. Opt. Express 7, 3403-3411 (2016). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-7-9-3403\">link<\/a><\/li>\n<li>J. Li, T. G. Bifano, J. Mertz, \u201cWidefield fluorescence microscopy with sensor-based conjugate adaptive optics using oblique back illumination\u201d, J. Biomed. Opt. 21,121504 (2016). <a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/journal-of-biomedical-optics\/volume-21\/issue-12\/121504\/Widefield-fluorescence-microscopy-with-sensor-based-conjugate-adaptive-optics-using\/10.1117\/1.JBO.21.12.121504.full\">link<\/a><\/li>\n<li>R. Barankov, J.-C. Baritaux, J. Mertz, \u201cHigh-resolution 3D phase imaging using a partitioned detection aperture: a wave-optic analysis\u201d, J. Opt. Soc. Am. A. 32, 2123-2135 (2015). <a href=\"https:\/\/www.osapublishing.org\/josaa\/abstract.cfm?uri=josaa-32-11-2123\">link<\/a><\/li>\n<li>J. Li, D. R. Beaulieu, H. Paudel, R. Barankov, T. G. Bifano, J. Mertz, \u201cConjugate adaptive optics in widefield microscopy with an extended-source wavefront sensor\u201d, Optica 2, 682-688 (2015). <a href=\"https:\/\/www.osapublishing.org\/optica\/abstract.cfm?uri=optica-2-8-682\">link<\/a><\/li>\n<li>P. Paudel, J. Taranto, J. Mertz, T. Bifano, \u201cAxial range of conjugate adaptive optics in two-photon microscopy\u201d, Opt. Express 23, 20849-20857 (2015). <a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-23-16-20849\">link<\/a><\/li>\n<li>J. Mertz, H Paudel, T. Bifano, \u201cField of view advantage of conjugate adaptive optics in microscopy applications\u201d, Appl. Opt. 54, 3498-3506 (2015). <a href=\"https:\/\/www.osapublishing.org\/ao\/abstract.cfm?uri=ao-54-11-3498\">link<\/a><\/li>\n<li>R. Barankov, J. Mertz, \u201cHigh throughput imaging of self-luminous objects through a single fibre\u201d, Nat. Commun. 5:5581 doi: 10.1038\/ncomms6581 (2014). <a href=\"https:\/\/www.nature.com\/articles\/ncomms6581\">link<\/a><\/li>\n<li>A. Mertiri, H. Altug, M. K. Kong, P. Mehta, J. Mertz, L. D. Ziegler, S. Erramilli, \u201cNonlinear midifrared photothermal spectroscopy using Zharov splitting and quantum cascade lasers\u201d, ACS Photonics 1, 696-702 (2014). <a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/ph500114h\">link<\/a><\/li>\n<li>J. Mertz, A. Gasecka, A. Daradich, I. Davison, D. Cot\u00e9, \u201cPhase-gradient contrast in thick tissue with a scanning microscope\u201d, Biomed. Opt. Express 5, 407-416 (2014). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-5-2-407\">link<\/a><\/li>\n<li>J.-D. Giese, T. N. Ford, J. Mertz, \u201cFast volumetric phase-gradient imaging in thick samples\u201d, Opt. Express 22, 1152-62 (2014). <a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-22-1-1152\">link<\/a><\/li>\n<li>J.-C. Baritaux, C. R. Chan, J. Li, J. Mertz, \u201cView synthesis with a partitioned-aperture microscope\u201d, Opt. Lett. 39, 685-88 (2014). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-39-3-685\">link<\/a><\/li>\n<li>R. Barankov and J. Mertz, \u201cSingle-exposure profilometry using partitioned aperture wavefront imaging\u201d, Opt. Lett. 38, 3961-3963 (2013). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-38-19-3961\">link<\/a><\/li>\n<li>P. Paudel, C. Stockbridge, J. Mertz, T. Bifano, \u201cFocusing polychromatic light through strongly scattering media\u201d, Opt. Express 21, 17299-308 (2013). <a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-21-14-17299\">link<\/a><\/li>\n<li>T. N. Ford, J. Mertz, \u201cVideo-rate imaging of microcirculation with single-exposure oblique back-illumination microscopy\u201d, J. Biomed Opt. 18, 066007 (2013). <a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/journal-of-biomedical-optics\/volume-18\/issue-6\/066007\/Video-rate-imaging-of-microcirculation-with-single-exposure-oblique-back\/10.1117\/1.JBO.18.6.066007.full\">link<\/a><\/li>\n<li>T. N. Ford, K. K. Chu, J. Mertz, \u201cPhase-gradient microscopy in thick tissue with oblique back-illumination\u201d, Nat. Meth. 9, 1195-1197 (2012). <a href=\"https:\/\/www.nature.com\/articles\/nmeth.2219\">link<\/a><\/li>\n<li>B. Parthasarathy, K. K. Chu, T. N. Ford, J. Mertz, \u201cQuantitative phase imaging using a partitioned detection aperture\u201d, Opt. Lett. 37, 4062-4064 (2012). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-37-19-4062\">link<\/a><\/li>\n<li>K. K. Chu, J. Mertz, \u201cSingle exposure complementary aperture phase microscopy with polarization encoding\u201d, Opt. Lett. 37, 3798-3800 (2012). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-37-18-3798\">link<\/a><\/li>\n<li>A. Mertiri, T. Jeys, V. Liberman, M. K. Hong, J. Mertz, H. Altug, S. Erramilli, \u201cMid-infrared photothermal heterodyne spectroscopy in a liquid crystal using a quantum cascade laser\u201d, Appl. Phys. Lett. 101,044101 (2012). <a href=\"https:\/\/aip.scitation.org\/doi\/10.1063\/1.4737942\">link<\/a><\/li>\n<li>K. P. Lillis, M. A. Kramer, J. Mertz, K. J. Staley, J. A. White, \u201cPyramidal cells accumulate chloride at seizure onset\u201d, Neurobiol. Of Disease 47, 358-366 (2012). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0969996112002021\">link<\/a><\/li>\n<li>T. N. Ford, D. Lim, and J. Mertz, \u201cFast optically sectioned fluorescence HiLo endomicroscopy,\u201d J. Biomed. Opt., 17, no. 2 (2012). <a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/Journal-of-Biomedical-Optics\/volume-17\/issue-02\/021105\/Fast-optically-sectioned-fluorescence-HiLo-endomicroscopy\/10.1117\/1.JBO.17.2.021105.full\">link<\/a><\/li>\n<li>E. Idoux and J. Mertz, \u201cControl of local intracellular calcium concentration with dynamic-clamp controlled 2-photon uncaging\u201d, PLoS ONE, 6, e28685 (2011). <a href=\"https:\/\/journals.plos.org\/plosone\/article?id=10.1371\/journal.pone.0028685\">link<\/a><\/li>\n<li>B. Goldberg, A. Yurt, Y. Lu, E. Ramsay, F. H. Koklu, J. Mertz, T. G. Bifano, and M. S. \u00dcnl\u00fc,\u00a0&#8220;Chromatic and spherical aberration correction for silicon aplanatic solid immersion lens for fault isolation and photon emission microscopy of integrated circuits,&#8221; Microelectronic Reliability, 51, 1637-1639 (2011). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S002627141100312X\">link<\/a><\/li>\n<li>J. Mertz, \u201cOptical microscopy with planar or structured illumination\u201d, Nat. Methods 8, 811-819 (2011). <a href=\"https:\/\/www.nature.com\/articles\/nmeth.1709\">link<\/a><\/li>\n<li>D. Lim, T. Ford, K. K. Chu, J. Mertz, \u201cOptically sectioned <em>in vivo<\/em> imaging with speckle illumination HiLo microscopy\u201d, J. Biomed. Opt. 16, 016014 (2011). <a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/Journal-of-Biomedical-Optics\/volume-16\/issue-1\/016014\/Optically-sectioned-in-vivo-imaging-with-speckle-illumination-HiLo-microscopy\/10.1117\/1.3528656.full\">link<\/a><\/li>\n<li>K. K. Chu, D. Lim, J. Mertz, \u201cPractical implementation of log-scale active illumination microscopy\u201d, Biomed. Opt. Express, 1, 236-245 (2010). <a href=\"https:\/\/www.osapublishing.org\/boe\/abstract.cfm?uri=boe-1-1-236\">link<\/a><\/li>\n<li>J. Mertz, J. Kim, \u201cScanning light-sheet microscopy in the whole mouse brain with HiLo background rejection\u201d, J. Biomed. Opt. 15, 016027 (2010). <a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/Journal-of-Biomedical-Optics\/volume-15\/issue-01\/016027\/Scanning-light-sheet-microscopy-in-the-whole-mouse-brain-with\/10.1117\/1.3324890.full\">link<\/a><\/li>\n<li>S. Santos, K. K. Chu, D. Lim, N. Bozinovic, T. N. Ford, C. Hourtoule, A. C. Bartoo, S. K. Singh, J. Mertz, \u201cOptically sectioned fluorescence endomicroscopy with hybrid-illumination imaging through a flexible fiber bundle\u201d, J. Biomed. Opt. 030502 (2009). <a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/journal-of-biomedical-optics\/volume-14\/issue-3\/030502\/Optically-sectioned-fluorescence-endomicroscopy-with-hybrid-illumination-imaging-through-a\/10.1117\/1.3130266.full\">link<\/a><\/li>\n<li>D. Lim, K. K. Chu, J. Mertz, \u201cWidefield fluorescence sectioning with hybrid speckle and uniform-illumination microscopy\u201d, Opt. Lett. 33, 1819-1821 (2008). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-33-16-1819\">link<\/a><\/li>\n<li>G. M. Price, K. K. Chu, J. G. Truslow, M. D. Tang-Schomer, A. P. Golden, J. Mertz, J. Tien, \u201cBonding of macromolecular hydrogels using perturbants\u201d, J. Am. Chem. Soc. 130, 6664-6665 (2008). <a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/ja711340d\">link<\/a><\/li>\n<li>N. Bozinovic, C. Ventalon, T. Ford, J. Mertz, \u201cFluorescence endomicroscopy with structured illumination\u201d, Opt. Express 16, 8016-8025 (2008). <a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-16-11-8016\">link<\/a><\/li>\n<li>D. Lim, K. K. Chu, J. Mertz, \u201cAutoconfocal microscopy with a continuous-wave laser and thermionic detection\u201d, Opt. Lett. 33, 1345-1347 (2008). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-33-12-1345\">link<\/a><\/li>\n<li>K. Lillis, A. Eng, J. White, J. Mertz, \u201cTwo-photon imaging of spatially extended neuronal network dynamics with high temporal resolution\u201d, J. Neurosci. Meth. 172, 178-184 (2008). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0165027008002525\">link<\/a><\/li>\n<li>A. Leray, K. Lillis, J. Mertz, \u201cEnhanced background rejection in thick tissue with differential-aberration two-photon microscopy\u201d, Biophys. J. 94, 1449-1458 (2008). <a href=\"https:\/\/www.cell.com\/biophysj\/biophysj\/abstract\/S0006-3495(08)70661-1\">link<\/a><\/li>\n<li>K. K. Chu, D. Lim, J. Mertz, \u201cEnhanced weak-signal sensitivity in two-photon microscopy by adaptive illumination\u201d, Opt. Lett. 32, 2846-2848 (2007). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-32-19-2846\">link<\/a><\/li>\n<li>C. Ventalon, R. Heintzmann, J. Mertz, \u201cDynamic speckle illumination microscopy with wavelet prefiltering\u201d, Opt. Lett. 32, 1417-1419 (2007). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-32-11-1417\">link<\/a><\/li>\n<li>K. K. Chu, R. Yi, J. Mertz, \u201cGraded-field autoconfocal microscopy\u201d, Opt. Express 15, 2476-2489 (2007). <a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-15-5-2476\">link<\/a><\/li>\n<li>A. Leray, J. Mertz, \u201cRejection of two-photon fluorescence background in thick tissue by differential aberration imaging\u201d, Opt. Express 14, 10565-10573 (2006). <a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-14-22-10565\">link<\/a><\/li>\n<li>C. Ventalon, J. Mertz, \u201cDynamic speckle illumination microscopy with translated versus randomized speckle patterns \u201c, Opt. Express 14, 7198-7209 (2006). <a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-14-16-7198\">link<\/a><\/li>\n<li>R. Yi, K. K. Chu, J. Mertz, \u201cGraded-field microscopy with white light\u201d, Opt. Express 14, 5191-5200 (2006).\u00a0<a href=\"https:\/\/www.osapublishing.org\/oe\/abstract.cfm?uri=oe-14-12-5191\">link<\/a><\/li>\n<li>T. Pons, J. Mertz, \u201cMembrane potential detection with second-harmonic generation and two-photon excited fluorescence: a theoretical comparison\u201d, Opt. Commun. 258, 203-209 (2006). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0030401805007704\">link<\/a><\/li>\n<li>C. Ventalon, J. Mertz, \u201cQuasi-confocal fluorescence sectioning with dynamic speckle illumination\u201c, Opt. Lett. 30, 3350-3352 (2005). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-30-24-3350\">link<\/a><\/li>\n<li>C. Katan, F. Terenziani, O. Mongin, M. H. V. Werts, L. Porr\u00e8s, T. Pons, J. Mertz, S. Tretiak, M. Blanchard-Desce, \u201cEffects of (multi)branching of dipolar chromophores on photophysical properties and two-photon absorption\u201d, J. Phys. Chem. A 109, 3024-3037 (2005). <a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/jp044193e\">link<\/a><\/li>\n<li>L. Porr\u00e8s, O. Mongin, C. Katan, M. Charlot, T. Pons, J. Mertz, M. Blanchard-Desce, &#8220;Enhanced two-photon absorption with novel octupolar propeller-shaped fluorophores derived from triphenylamine&#8221;, Org. Lett. <em>6<\/em>, 47-50 (2004). <a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/ol036041s\">link<\/a><\/li>\n<li>L. Porr\u00e8s, O. Mongin, C. Katan, M. Charlot, B. K. G. Batthula, V. Jouikov, T. Pons, J. Mertz, M. Blanchard-Desce, \u201cTwo-photon absorption and fluorescence with quadrupolar and branched chromophores \u2013 effect of structure and branching\u201d, J. Nonlinear Opt. Phys. &amp; Mat. 13, 451-459 (2004). <a href=\"https:\/\/www.worldscientific.com\/doi\/abs\/10.1142\/S0218863504002109?journalCode=jnopm\">link<\/a><\/li>\n<li>J. Mertz, \u201cNonlinear microscopy: new techniques and applications\u201d, Curr. Opin. Neuro. 14, 610-616 (2004). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0959438804001278\">link<\/a><\/li>\n<li>T. Pons, J. Mertz, \u201cAutoconfocal microscopy using nonlinear transmitted light detection\u201d, J. Opt. Soc. Am. B 21, 1486-1493 (2004). <a href=\"https:\/\/www.osapublishing.org\/josab\/abstract.cfm?uri=josab-21-8-1486&amp;origin=search\">link<\/a><\/li>\n<li>L. Porr\u00e8s, C. Katan,<sup> <\/sup>O. Mongin, T. Pons, J. Mertz, M. Blanchard-Desce, \u201cTwo-Photon Absorption and Fluorescence in Nanoscale Multipolar Chromophores: Effect of dimensionality and charge-symmetry\u201d, J. Mol. Struct. 704, 17-24 (2004). <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0022286003008548\">link<\/a><\/li>\n<li>L. Porr\u00e8s, O. Mongin, C. Katan, M. Charlot, T. Pons, J. Mertz, M. Blanchard-Desce, \u201cEnhanced two-photon absorption with novel octupolar propeller-shaped fluorophores derived from triphenylamine\u201d, Org. Lett. 6, 47-50 (2004). <a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/ol036041s\">link<\/a><\/li>\n<li>T. Pons, L. Moreaux, O. Mongin, M. Blanchard-Desce, J. Mertz, \u201cMechanisms of membrane potential sensing with second harmonic generation microscopy\u201d, J. Biomed. Opt. 8, 428-431 (2003). <a href=\"https:\/\/www.spiedigitallibrary.org\/journals\/Journal-of-Biomedical-Optics\/volume-8\/issue-03\/0000\/Mechanisms-of-membrane-potential-sensing-with-second-harmonic-generation-microscopy\/10.1117\/1.1581871.full?SSO=1\">link<\/a><\/li>\n<li>L. Moreaux, T. Pons, M. Blanchard-Desce, J. Mertz, \u201cElectro-optic response of second-harmonic generation membrane potential sensors\u201d, Opt. Lett. 25, 625-627 (2003). <a href=\"https:\/\/www.osapublishing.org\/ol\/abstract.cfm?uri=ol-28-8-625\">link<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Complete list of publications Biomicroscopy lab patents Biomicroscopy lab publications: N. Khetan and J. Mertz, &#8220;Far-field compressive ultrasound beamforming&#8221;, arXiv 2603.22496 (2026). link. M. Sheinman, M. Polkovnikov, L. Saunders, P. Vujkovic-Cvijin, S. Erramilli, L. D. Ziegler, K. Kundu, R. Rajagopal, B. Zhao, C. McMahon, M. K. Hong, and J. Mertz, &#8220;Widefield pump-probe microscopy with coherent [&hellip;]<\/p>\n","protected":false},"author":16427,"featured_media":0,"parent":0,"menu_order":4,"comment_status":"closed","ping_status":"closed","template":"page-templates\/profiles.php","meta":[],"_links":{"self":[{"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/pages\/100"}],"collection":[{"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/users\/16427"}],"replies":[{"embeddable":true,"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/comments?post=100"}],"version-history":[{"count":50,"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/pages\/100\/revisions"}],"predecessor-version":[{"id":849,"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/pages\/100\/revisions\/849"}],"wp:attachment":[{"href":"https:\/\/sites.bu.edu\/biomicroscopy\/wp-json\/wp\/v2\/media?parent=100"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}