Tagged: amacrine cell

EyeWire: Crowd Sourced Research

November 4th, 2013 in Pop Culture 0 comments


Image courtesy of Seung Lab, MIT

Image courtesy of Seung Lab, MIT

Do you fancy yourself a scientist? Are you unable to work in a laboratory? Now with online crowd sourcing technology, you can be on the front line of cutting-edge discoveries. In the same fashion that people raise money through crowd sourcing on websites like KickStarter and GoFundMe, researchers at MIT have created a program to capitalize on the thousands of people that have access to a computer. The project is headed by Dr. Sebastian Seung using data collected from the Max Planck Institute for Medical Research. The goals of the project are to reconstruct the three-dimensional shapes of retinal neurons from two-dimensional images, to identify synapses in order to map the connections between neurons, and to relate this connectivity with the known activity of the neurons. Completion of these tasks will contribute to the overall goal of developing the connectome, a project with the same ideal of the Human Genome Project, but for neural connections instead of genes.

Currently, Eyewire is mapping four types of cells: amacrine, bipolar, ganglion, and glial cells. Many processes are used to map these cells. First, cells are photographed using serial block-face scanning electron microscopy (SBFSEM). This technique uses two groups of materials to stain a sample. The heavy metals osmium, lead, and uranium are used and an epoxy resin, or a type of plastic, are combined to produce a sample that can easily be read by a scanning electron microscope (SEM). The heavy metals react with a focused beam of electrons coming from the SEM to create a high resolution two dimensional image. A three dimensional image is created by combining layers of the sample, with each layer being about 70 microns thick.


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Microsaccades: Our Visual Framerate

February 25th, 2012 in Opinion 0 comments

Dr. Frank Werblin at UC Berkeley has dedicated nearly his entire academic life to the study of the eye and visual processing. More recently Dr. Werblin has completed his model of the retinal processing system he has deemed “The Retinal Hypercircuit”. The Hypercircuit itself is made up of the five classical retina cell types: Photoreceptor, Horizontal, Bipolar, Amacrine and Retinal Ganglion Cells, but more recently, a collaborative effort has identified over 50 morphologically different cell types. Of this vast array of unique cell types the most variance falls in the morphology of the Amacrine cells, which offer horizontal properties in the Inner Plexiform Layer between the Bipolar and Ganglion Cells. Although the mechanics behind the Hypercirtuit are fascinating, what I find arguably more important is the output of the system, a topic which Werblin has indirectly stumbled upon, but which I believe could potentially lead to an incredibly progressive line of research. More

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